Otolemur garnettii (small-eared galago): 100963850
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Entry
100963850 CDS
T07855
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04151
PI3K-Akt signaling pathway
oga04510
Focal adhesion
oga04512
ECM-receptor interaction
oga04974
Protein digestion and absorption
oga05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100963850 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100963850 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100963850 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100963850 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100963850 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oga00536
]
100963850 (COL2A1)
Glycosaminoglycan binding proteins [BR:
oga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100963850 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
100963850
NCBI-ProteinID:
XP_003793619
Ensembl:
ENSOGAG00000005487
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQKLVLLTLLVAAVLRCQSQDVQEAGSCVQDGQRYNDKDVWKPEACQICVCDTG
TVLCDDIICEDVKDCLSPEIPFGECCPICPTDLATASGPPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGSPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPVGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKAGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPVGPTGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGSRGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGSRGDSGPAGRAGDPGLQGPAGPPGEKGEPG
DEGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGALGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPSGPAGARGLPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQPAGSLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPASVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTASIQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTTLKDGCTK
HTGKWDKTVIEYRSQKTSRLPIIDIAPMDIGGPDQEFGVDIGPACFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagaagttggtgctgctgacgctgctcgttgccgctgtc
cttcggtgtcagagccaggatgtccaggaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggacgtgtggaagcctgaggcctgccagatctgtgtctgtgacactggg
actgtcctctgcgatgacataatctgtgaagacgtgaaagactgcctcagtcctgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactgccagtgggccacca
ggaccaaagggacagaaaggagaacccggagacatcaaggatatcgtaggacccaaagga
cctcctgggcctcagggacctgcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagaacctgggacccctggaaat
cctggcccccctggtcctcctggtccccctggaccccctgggcttggtggaaactttgct
gcccagatggctggtggatttgatgagaaggctggtggtgcccagatgggagtaatgcaa
ggaccaatgggccccatgggacctcgaggacctccaggccctgctggctctcctggacct
caaggatttcaaggcaatcctggtgaacctggtgaacctggcgtctctggtcctatgggt
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggtgaagctggaaaaccc
ggaaaatctggtgaaagaggtcctcctggccctcagggtgctcgtggcttcccaggaact
ccaggccttccaggtgtcaaaggtcacagaggttacccaggcctagatggtgctaaggga
gaagctggtgctcctggcgtgaagggtgagagtggttcccctggtgagaatggttctcca
ggaccaatgggtccccgtggcctgcctggtgaaagaggacgaaccggacctgctggtgct
gcgggtgcccggggcaatgatggccagccaggccctgcagggcctccgggtcccgtcggt
cctgctggtggtcctggcttccctggtgctcccggagccaagggtgaagctggccccact
ggtgcccgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggtactccagggtcc
cctggacccgccggtgcctctggtaaccctggaactgatggaattcccggagccaaagga
tctgctggtgctcctgggattgctggtgctcctggcttccctggaccccgtggtcctcct
ggccctcaaggtgcaactggtcctctgggcccaaaaggtcagacgggtgaacctggtatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccctgccggcccccaggga
gcccctggtccggctggagaagaaggcaaaagaggtgcccgtggagagcctggtggtgct
gggcctgttgggcctcctggagaaagaggtgctcccggcaaccgtggcttcccagggcag
gatggtctagcaggtcccaagggagcccctggagagcgagggcccgtgggccttgctggt
cctaagggagccaatggtgaccctggccgtcctggagaacctggtcttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggcccttctggagcc
cctggggaagatggtcgccctggacctccaggtcctcagggagctcgtgggcagcctggt
gtcatgggtttccccggccccaaaggtgccaatggtgagcctggcaaagctggtgagaag
ggcctgcctggtgctcctggcctgagaggtcttcctggcaaagatggtgagacaggtgct
gctggcccccccggccctgctggacctgctggtgaacgaggcgagcagggcgctcctggg
ccatctgggttccagggacttcctggccctccaggtcccccaggtgaaggtggaaaagca
ggtgaccagggtgttcctggtgaagctggagctcccggccttgtgggtcccaggggtgaa
cgaggtttcccaggtgaacgtggctctcccggtgcccagggcctccagggtccccgtggc
ctccctggcactcctggcactgatggtcccaaaggtgcatctggcccagttggccccact
ggggctcagggtcctccgggtcttcagggaatgcctggcgagaggggagcagctggtatc
gctggacccaagggagacaggggtgatgttggagagaaaggccctgagggagcccccgga
aaggacggtggacggggtctgactggtcccattgggccccccggcccagctggtgccaat
ggtgagaagggagaagttggaccccctggtcctgcaggaagtgctggtgctcgaggtgcc
ccaggtgaacgtggagagactgggccccccgggccagctgggttcgccggacctcccggt
gctgatggccagcctggtgccaagggtgaacaaggagaggctggccagaagggtgatgct
ggtgcccctggtcctcagggtccctctggagcgcctggacctcagggtcctactggagtg
actggtcctaaaggatcccgtggtgcccaaggtcccccgggagccactggattccctgga
gctgctggccgtgttggacctcctggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggttctcgaggagacagtggcccggccggccga
gctggtgaccctggtctccaaggtcctgctgggccccctggcgagaaaggagagcctgga
gatgagggtccctctggtgccgatggtcctccaggtccccaaggtctggctggtcagaga
ggcattgttggtctgcctgggcagcgtggagagagaggattccctggcctgcctggacca
tcaggtgagcctggcaagcagggtgcacctggtgcatctggagacagaggtcctcctggc
cctgtgggtcctcctggcctgactggtcctgcaggtgaacctggacgagagggaagcccc
ggtgctgatggcccccctggcagagatggagcagctggagtcaagggtgatcgtggtgag
actggtgccttgggtgctcctggagcccctggaccccctggctctcctggccctgctggc
ccaactggcaaacagggagacagaggagaggctggtgcacaaggccccatgggaccctca
ggaccagctggagcccggggactcccaggccctcaaggcccccgtggagacaaaggagag
actggagaagctggcgagaggggcctgaagggacatcgtggcttcactggtctgcagggc
ctgcctggtcctcctggtccttctggggaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtcggtccctctggcaaagatggtgctaatggaatc
cctggtcctattgggcctcctggtccccgtggacgttcaggcgaaactggaccagctggt
cctcctggaaatcctggccctcctggccctccaggtccccctggccctggcatcgacatg
tctgccttcgctggcctaggccagagagagaagggcccagatcctctgcagtacatgcgg
gctgaccagccagccggctccctcagacagcatgatgccgaggtggatgccacattgaag
tccctcaacaaccagatcgagagcatccgcagccctgagggctcccgcaagaaccctgca
cgcacctgccgggacctgaaactctgccaccctgagtggaagagtggagactactggatc
gaccccaaccagggctgcaccttggatgccatgaaggtcttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgagtgtgcccaagaagaactggtggagcagcaag
agcaaggagaagaagcacatctggtttggggagaccatcaatgggggcttccacttcagc
tatggagatgacaacctggctcccaacactgccagcatccagatgaccttcctacgtctg
ctgtccacggagggctctcagaacatcacctaccactgcaagaacagcattgcctacctg
gacgaagcagctggcaaccttaagaaggccttgctcatccagggctccaatgacgtagag
atccgggcagagggcaacagcaggttcacatacaccaccctgaaggatggctgcacgaaa
cacaccggtaagtgggacaagactgtcatcgagtaccggtcacagaagacctcacgcctc
cccatcattgacattgcacccatggacataggagggcctgaccaggaatttggtgtggac
atagggccagcctgcttcttgtaa
DBGET
integrated database retrieval system
