Otolemur garnettii (small-eared galago): 100965001
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Entry
100965001 CDS
T07855
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04120
Ubiquitin mediated proteolysis
oga04137
Mitophagy - animal
oga04141
Protein processing in endoplasmic reticulum
oga05012
Parkinson disease
oga05014
Amyotrophic lateral sclerosis
oga05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100965001 (PRKN)
04120 Ubiquitin mediated proteolysis
100965001 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100965001 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
100965001 (PRKN)
05014 Amyotrophic lateral sclerosis
100965001 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
100965001 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oga04131
]
100965001 (PRKN)
04121 Ubiquitin system [BR:
oga04121
]
100965001 (PRKN)
03029 Mitochondrial biogenesis [BR:
oga03029
]
100965001 (PRKN)
Enzymes [BR:
oga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100965001 (PRKN)
Membrane trafficking [BR:
oga04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
100965001 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
100965001 (PRKN)
Xenophagy
Other xenophagy associated proteins
100965001 (PRKN)
Ubiquitin system [BR:
oga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100965001 (PRKN)
Mitochondrial biogenesis [BR:
oga03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
100965001 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Dsc3_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
100965001
NCBI-ProteinID:
XP_023370377
Ensembl:
ENSOGAG00000010979
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCD
LDQQSIVHIVQKPWRKGHEMAATGGDGPRSTTGGPGREPQSLTRVDLSSSLLPADSVGLA
VILDTESRSDPPRAAGPGRPVYNSFYVYCKGPCHRVQPGKLRVQCNTCKQATLTLAQGPS
CWEDVLIPNRMSGECQSPNCPGTTAEFFFKCGAHPTSNKDTSVALNLITTNSRDISCITC
TDVRSPVLVFQCNYRHVICLDCFHLYCVTRLNDRQFVHDPQLGYTLPCVAGCPNSLIKEL
HHFRILGEEQYSRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPGQRRVACERDSGLGCG
FVFCRECKEADHDGECSALFEASGTVAQAYRVDERAAEQARWEEASKETIKQTTKPCPRC
HVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFDV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccagctgaccag
ttgcgtgtgattttcgctgggaaggagctgaggaatgactggacagtgcagaactgtgac
ctggatcagcagagcatcgttcacattgtgcagaaaccatggagaaaaggccacgaaatg
gctgcaactggaggagacggccccagaagcaccactgggggccctggcagggagccccag
agcttaactcgtgtggacctcagcagctccctcctcccagcagactcagtggggctggcg
gtgattctggacaccgagagcaggagtgatcccccacgagcggcaggtccaggcagacca
gtctacaacagcttttatgtttactgcaaaggcccctgccatagagtacagccaggaaaa
ctcagggtccagtgcaacacctgcaaacaagcaacgctcaccttggcccagggtccatct
tgctgggaagatgtcttaattccaaaccggatgagtggtgaatgccagtctccaaactgc
cctgggactacagcagaatttttctttaaatgtggagcacacccaacctccaacaaggac
acctcagtagctctgaacctgatcacaaccaacagtcgagacatctcttgcataacgtgc
acagacgtcaggagccctgtcctggttttccagtgcaactatcgccatgtgatctgctta
gactgtttccacctgtactgtgtgacaagactcaacgaccggcagttcgtccacgaccct
cagcttggctacaccttgccttgtgttgctggctgtcccaactccttgattaaagagctt
catcacttcaggattctgggagaagagcagtacagccgctaccagcagtacggcgccgag
gagtgtgtgctgcagatggggggcgtgctgtgcccccgccctggctgcggagcggggctg
ctgcccgagccaggccagaggagagtcgcctgtgagagggacagcggcctgggctgtggg
ttcgtcttctgccgggagtgtaaggaggccgaccatgacggggaatgcagcgctctgttt
gaggcctcaggaacagtcgctcaggcctatagagttgatgaaagagcagcggagcaagcc
cgctgggaggaggcctccaaggaaaccatcaagcagaccacgaagccctgccctcggtgc
cacgttcctgttgagaaaaatggaggatgcatgcacatgaagtgtccgcagccccagtgc
cggctcgagtggtgctggaactgtggctgcgagtggaaccgcgtctgtatgggggaccac
tggttcgacgtgtag
DBGET
integrated database retrieval system
