Otolemur garnettii (small-eared galago): 100965029
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Entry
100965029 CDS
T07855
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100965029 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100965029 (CNOT10)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100965029 (CNOT10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
ARM_TT21_N
TPR_12
TPR_19
TPR_8
ARM_TT21
TPR_MalT
TPR_7
TPR_17
DUF6058
Motif
Other DBs
NCBI-GeneID:
100965029
NCBI-ProteinID:
XP_003781821
Ensembl:
ENSOGAG00000007295
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MAADKPADQGAEKHEGTGQSSGITDQEKELSTSALQAFTSGNYDACLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNSNKDGSNHKAESGVLIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMQTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSNQLGGNTESSESNETCRCSILACSAYVALALGDNLMALNHADKLLQQPKLSG
SLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSG
KRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYDKARKCLHQAASMIHPKEVPPEAILLAV
YLELQNGNTQLALQIIKRNQLLPAVKTHTDVRKKPVFQPVHPIQPIQMPAFTTVQRK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgcagatcagggagcagaaaaacatgaaggcacaggtcagtcc
tctgggatcactgatcaagagaaggagttatccaccagtgctctccaagctttcacatct
ggaaattatgatgcctgtctacaacaccttgcctgtctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtagctgagttttttaaaagcaaccaaacaacaaca
gacaatttgagacaaacacttaaccagctgaagaatcaggtccattcggctgttgaagaa
atggatggattagatgatgttgaaaacagcatgttgtattataaccaagcggtcattctt
tatcatctgcgtcagtatacagaagcgatatcagttggtgaaaaactttatcaatttata
gaaccttttgaagaaaaatttgcccaagcagtatgttttttgcttgtagacctgtatata
ttaacctaccaagctgagaaagctttgcatcttcttgctgtcctcgaaaaaatgatttca
cagggtaacaataataaaaatgggaagaatgagactggtaataactccaacaaagatgga
tctaatcataaagctgaaagtggagttttaatagaagctgcaaaatcaaagatacatcag
tataaagtgcgagcttatatccaaatgaaatccctgaaagcatgcaaaagggagatcaag
tcagtcatgaacacagctggaaattctgcaccctctctgtttcttaaaagcaattttgag
tacttaaggggcaattatcgaaaagctgtgaagcttttaaatagttcaaacattgctgag
catccaggattcatgcaaacaggtgaatgtttgagatgcatgttctggaataatcttggt
tgtatccattttgccatgagcaagcacaatttgggaattttctactttaaaaaggctctg
caggagaatgacaatgtctgtgctcaactcagtgcaggtagcactgatccaggcaaaaaa
ttttcaggaagacccatgtgcacgttactaaccaataagagatatgagttgctatataac
tgtggaattcagcttcttcacattggaaggcctcttgctgcctttgagtgtctgattgaa
gctgttcaggtttatcatgcaaatcctcgcctttggctaaggctggctgagtgctgcatt
gctgccaataaggggacatctgaacaagaaactaaaggtcttccaagcaaaaaaggaatt
gtacagtctattgttggtcaaggctatcaccgtaaaatagttctggcttcacagtccata
cagaacactgtttataacgatggacagtcttcagccattcctgtagccagtatggagttt
gcagccatttgtctcagaaatgccttgttgctactacctgaagaacagcaagatccaaag
caggaaaatgggtctaaaaatagtaatcaattaggtgggaacacagaaagcagcgaaagc
aatgaaacttgcaggtgctccatccttgcttgcagtgcttatgtggctctggctttgggt
gataaccttatggctttgaaccatgcagataaacttctccagcagccaaagctatcagga
tctcttaagtttttgggccatttatatgctgcagaagcactcatctctctcgacagaata
tctgatgctattactcacttgaacccagagaatgtcactgatgtctccttagggatctct
tcaaatgagcaagaccaaggatcagacaaaggtgaaaatgaagcaatggaatcctctggg
aagcgagcacctcagtgctaccctagttccgtcaactctgccaggactgtgatgctgttc
aaccttggcagtgcttactgcctccgaagcgagtatgacaaagcccgaaagtgtcttcac
caggcggcttcaatgatccatcctaaagaggtaccccctgaagccatcttgctggcagtc
taccttgagctgcagaacggtaatacccagctggccttacagatcatcaagaggaatcag
ctactccctgcagtgaaaacacacacagatgtgagaaagaagccagtgtttcagcccgtc
cacccaatccagcccatccaaatgccagcttttaccactgtacagagaaagtga
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