Otolemur garnettii (small-eared galago): 100965125
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Entry
100965125 CDS
T07855
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03020
RNA polymerase
oga03420
Nucleotide excision repair
oga05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100965125 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
100965125 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
100965125 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oga03021
]
100965125 (POLR2B)
03400 DNA repair and recombination proteins [BR:
oga03400
]
100965125 (POLR2B)
Enzymes [BR:
oga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100965125 (POLR2B)
Transcription machinery [BR:
oga03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100965125 (POLR2B)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100965125 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
100965125
NCBI-ProteinID:
XP_012665816
Ensembl:
ENSOGAG00000015999
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggatgaggacatgcaatatgatgaggatgatgatgaaatcaccccggat
ctgtggcaggaagcatgctggattgtaatcagttcctattttgatgagaaagggttggtc
cgacaacaactggactcttttgacgagtttattcagatgtccgttcagagaattgtggaa
gatgccccgcccatagacctgcaagctgaagctcagcacgccagtggggaggttgaggag
ccgccaagatatttgctgaagtttgaacagatttacctctccaagcctacccattgggaa
agagatggtgctccttcaccaatgatgccaaatgaagccagattaagaaatcttacgtat
tctgctccactctatgttgatataacaaaaacagtcattaaggaaggtgaagaacaactt
cagactcagcatcagaaaacttttataggaaaaattcccattatgttgcggtcaacttac
tgcctattaaatggcttaacagatcgtgatctttgtgagttaaatgaatgccctttggat
cctggtggctatttcattattaatggatcagaaaaggttctgattgctcaggagaaaatg
gcaacaaacacagtttatgtgtttgccaagaaggattctaagtatgcctacacaggagag
tgtaggtcatgtctggagaattcttcccgacccaccagtaccatatgggttagcatgctg
gcaagaggaggacagggtgcaaagaagagcgccattggtcagcgcattgtggcaactctg
ccgtacatcaagcaagaagttcccatcattattgtcttcagagccttaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagatccagagatgatggaaatg
gttaaaccttctctcgatgaagcttttgtcatccaagaacagaatgttgcgctaaatttc
attggttcaagaggggcaaagcctggtgtcactaaagagaaaagaattaaatatgctaaa
gaagtcttgcagaaggagatgctccctcatgtgggtgtcagtgatttttgtgagaccaaa
aaagcctatttcttggggtatatggttcataggttactgctagcagctttgggtagaaga
gaactggatgacagagatcattatggaaacaaaagactggatcttgctgggcctctgctc
gcattcttatttagaggtatgtttaagaatttgcttaaagaagtgcgaatctatgcacag
aagtttattgatcgaggaaaagattttaacttggagttggcaatcaaaacaaggattata
tctgatggcctaaaatactctttagcgactggaaactggggtgaccagaagaaagctcat
caagccagggctggagtatctcaggtattaaatcgcctgacttttgcatctactctttct
cacctgcgtcgtttgaattctcccattggtagggatgggaagctagcaaaaccgagacag
ctgcataataccctgtggggcatggtgtgtcctgctgagaccccagagggccatgctgta
ggactcgtgaagaatttagccctgatggcttatatttcagtcggatctcaaccatctccg
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagcc
attgccgatgcaaccaagatttttgttaatggctgctgggttggaatccataaagatcct
gaacagcttatgaacaccctgaggaaactgcggcgtcagatggacatcattgtgtctgaa
gtttctatgatcagagatattcgagagagggagattcgtatctatacagatgcaggccgt
atttgtagaccacttcttattgtggaaaaacaaaagctacttttgaagaagagacatatt
gaccaactgaaagagagagaatataacaactacagttggcaggatctcgtggccagtggg
gttgtggaatacattgataccctggaagaagaaacggtgatgctggcgatgacgccagac
gacttgcaggagaaggaggtggcttactgctcgacctacacgcactgcgagatccacccg
tccatgatccttggcgtctgtgcatccatcattcccttccctgatcacaaccagtcccct
agaaacacataccagtctgctatgggcaagcaggctatgggggtctatatcaccaacttc
catgttcgtatggacacgctggcccacgttctttattatcctcaaaaaccccttgtgact
acaaggtctatggaatatctacgatttagagagctgccagcaggtatcaactcaatcgtg
gccatcgcatcgtacactggatataatcaagaggactctgtcatcatgaatcgttctgct
gtagaccgagggtttttcaggtctgttttctatcgctcgtacaaagaacaggagtctaaa
aaaggctttgatcaagaagaagtttttgagaaacctactcgtgaaacatgccagggcatg
aggcatgccatttatgacaagctggatgatgatggtttgatagctccaggggttcgtgta
tcaggggatgatgttattataggcaagacagtcaccttgcctgaaaatgaagatgaactg
gagagcaccaacagacgctataccaagagagactgtagcaccttcctccgaactagcgag
acgggtattgtggatcaggttatggtaacgctcaaccaggaaggatataaattttgtaaa
ataagggtacgctctgttagaatcccacagattggagataaatttgctagtcgacacggt
cagaagggtacttgtggtattcagtacagacaagaggatatgcctttcacctgtgaaggt
atcacccctgatatcatcataaatcctcacgccatcccctctcgtatgacgattggtcac
ttgattgaatgtcttcaagggaaggtatctgctaataagggtgaaattggtgatgccacc
ccattcaatgatgctgtcaatgtacagaagatttctaaccttttatctgattatggttac
catctcagaggaaatgaggtcctgtacaatggcttcactgggcgaaaaatcacttcccag
atttttattggccccacttattaccagcgtttgaagcatatggtagatgacaagattcat
tctcgtgctagaggacctattcagatcctgaacagacagcccatggagggtagatctcgt
gatggtggcttgcgttttggagaaatggaacgagactgtcagattgcccacggagcagcc
cagtttctgagggaaaggttgtttgaggcgtcagatccctatcaggttcatgtttgcaat
ctgtgtggaataatggcgattgccaacaccaggacccacacatacgagtgcaggggctgc
cgcaataaaacccagatttctttggtgcgaatgccttacgcgtgcaaactgctgtttcag
gagctcatgtctatgagcattgccccgcgcatgatgagtgtttag
DBGET
integrated database retrieval system
