KEGG   Otolemur garnettii (small-eared galago): 100965134
Entry
100965134         CDS       T07855                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03013  Nucleocytoplasmic transport
oga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100965134 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100965134 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oga03019]
    100965134 (THOC3)
   03041 Spliceosome [BR:oga03041]
    100965134 (THOC3)
Messenger RNA biogenesis [BR:oga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100965134 (THOC3)
Spliceosome [BR:oga03041]
 Complex C
  Other components
   EJC/TREX
    100965134 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100965134 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_Vps41 DSE1_N Beta-prop_WDR36-Utp21_1st eIF2A Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_NOL10_N WD40_MABP1-WDR62_1st RMC1_N Beta-prop_HPS5 NBCH_WD40 Tricorn_2nd WDR90_beta-prop_4th PD40 B-prop_COPA_B_2nd TRM82_WD PAC11 Beta-prop_ACSF4 Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_WDR75_1st ASA1 Beta-prop_WDR41 Beta-prop_Nup120_160 Peptidase_S9_N Beta-prop_NWD2_C Cytochrom_D1 Beta-prop_WDR11_1st DPPIV_N YNCE TP_0598_N Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 100965134
NCBI-ProteinID: XP_003781968
Ensembl: ENSOGAG00000003503
LinkDB
Position
Unknown
AA seq 375 aa
MRLAAAPGLTVPRWPGSVRVWGPSMAVPTAAMGPSALGQSGPGSMAPWCSVSSGPSRYVL
GMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLAKENNYR
GHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTI
AVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKP
VQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSH
DGKMLASASEDHFIDIAEVETGDKLWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSS
REAGTVKLFGLPNDS
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgcgtttggcggcggcgccaggcctgacggtccctaggtggccgggcagcgtacgcgtc
tggggacccagcatggcggtgcccacagcggccatggggccgtcggcgctgggccagagc
ggtcctggctcgatggccccctggtgctcagtgagcagcggcccgtcgcgctacgtgctc
gggatgcaggaactgttccggggccacagcaagacgcgcgagttcccggcgcatagcgcc
aaggtacactctgtggcctggagctgcgacgggcgtcgcttagcctcggggtccttcgac
aagacggccagcgtcttcttgctggagaaggaccgattggccaaagaaaacaattatcgg
ggacatggggatagtgtggaccagctttgttggcatccaagtaatcccgacctttttgtc
actgcatctggagataaaaccattcgcatctgggatgtgaggactaccaaatgcattgcc
actgtgaacactaaaggagagaacattaatatctgctggagtcctgatgggcagaccatt
gctgtaggcaacaaggatgatgtggtgacctttattgatgccaagacacaccgttccaaa
gcagaagagcagttcaagtttgaagtcaatgaaatttcctggaacaatgacaataacatg
ttcttcctgacaaatggcaatggttgtatcaacatcctcagctacccagaactgaagcct
gtgcagtccatcaatgcccatccttctaactgcatctgtatcaagtttgaccccatgggg
aaatactttgctacaggaagtgcggatgctttggtcagcctttgggatgtggatgagtta
gtatgtgttcggtgcttttctaggctggattggcctgtgaggacgctcagttttagccat
gatggaaagatgctggcatcagcatcagaagatcattttattgacattgctgaagtagaa
acaggagacaagctatgggaggtgcagtgtgagtctccgaccttcaccgtggcttggcac
cccaaaaggccactgctggcatttgcctgtgatgacaaagatggcaaatatgacagcagt
cgggaagccggaactgtgaagctgtttggacttcctaatgattcctga

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