Entry |
|
Symbol |
HDAC1
|
Name |
(RefSeq) histone deacetylase 1 isoform X2
|
KO |
|
Organism |
oga Otolemur garnettii (small-eared galago)
|
Pathway |
oga03082 | ATP-dependent chromatin remodeling |
oga04213 | Longevity regulating pathway - multiple species |
oga04613 | Neutrophil extracellular trap formation |
oga04919 | Thyroid hormone signaling pathway |
oga05202 | Transcriptional misregulation in cancer |
|
Brite |
KEGG Orthology (KO) [BR:oga00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100965265 (HDAC1)
03083 Polycomb repressive complex
100965265 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100965265 (HDAC1)
04350 TGF-beta signaling pathway
100965265 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100965265 (HDAC1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100965265 (HDAC1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100965265 (HDAC1)
09149 Aging
04213 Longevity regulating pathway - multiple species
100965265 (HDAC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100965265 (HDAC1)
05202 Transcriptional misregulation in cancer
100965265 (HDAC1)
05206 MicroRNAs in cancer
100965265 (HDAC1)
05203 Viral carcinogenesis
100965265 (HDAC1)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
100965265 (HDAC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100965265 (HDAC1)
05165 Human papillomavirus infection
100965265 (HDAC1)
09164 Neurodegenerative disease
05016 Huntington disease
100965265 (HDAC1)
09165 Substance dependence
05031 Amphetamine addiction
100965265 (HDAC1)
05034 Alcoholism
100965265 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:oga03036]
100965265 (HDAC1)
Enzymes [BR:oga01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100965265 (HDAC1)
Chromosome and associated proteins [BR:oga03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100965265 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
100965265 (HDAC1)
BRAF-HDAC complex
100965265 (HDAC1)
REST complex
100965265 (HDAC1)
SHIP complex
100965265 (HDAC1)
MiDAC complex
100965265 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100965265 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100965265 (HDAC1)
Chromatin remodeling factors
NuRD complex
100965265 (HDAC1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
482 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAIPEESGDEDEEDPDKRISICSSDKRIACEEEF
SDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEKTKEEKPEAKGVKEEVK
LA |
NT seq |
1449 nt +upstreamnt +downstreamnt
atggcgcagacgcagggcaccaggaggaaagtctgttactactacgacggggatgttgga
aattattattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttgctacttaactatggtctctaccgaaaaatggaaatctatcgccctcataaagccaat
gctgaggaaatgaccaagtaccacagtgatgactacattaaattcttgcgctccatccgt
ccagataacatgtctgaatacagcaagcagatgcagagattcaacgttggtgaggactgt
ccagtatttgatggcctgtttgagttctgtcagttgtctactggtggctctgtggcaagt
gctgtgaaacttaataagcagcagacggacatcgctgtgaattgggctgggggcctgcac
catgcaaagaagtccgaggcatctggcttctgttacgtcaatgatatcgtcttggccatc
ctggaactgctaaagtatcaccagagggtgctgtatattgacattgatattcaccatggc
gatggcgtggaagaggccttctataccacagaccgggtcatgactgtgtcctttcataaa
tatggagagtacttcccaggaactggggacctacgggatattggggctggcaaaggcaag
tattatgctgttaactacccgctccgagatgggattgatgacgagtcctatgaggccatt
ttcaagccggtaatgtccaaagtaatggagatgttccagcccagtgcagtggtcttacag
tgtggctcagactccctgtctggggatcggttaggttgcttcaatttgaccatcaaaggg
catgccaagtgcgtggaatttgtcaaaagcttcaacctgcctatgttgatgctgggagga
ggtggttacaccattcgtaatgttgctcgatgctggacatatgaaacagctgtggccctg
gacacagagatccctaatgagcttccatacaatgactactttgaatactttggtccagac
ttcaagcttcacatcagcccctccaatatgactaaccagaatactaatgaatatttggag
aagatcaaacagcgactgtttgagaacctcaggatgctgccccatgcgccaggggttcag
atgcaggcaattcctgaggatgccatcccagaggaaagtggcgatgaggatgaagaagac
cctgacaaacgcatctccatctgttcctctgacaaacgaattgcctgtgaggaagagttc
tctgactctgatgaggaaggagagggtggccgaaagaattcttccaacttcaaaaaagct
aagagagtcaaaacagaagatgaaaaagagaaagatccggaagagaagaaagaagttaca
gaagaggagaaaaccaaggaggagaagccagaagccaaaggggtcaaggaagaggtcaag
ttggcctga |