Otolemur garnettii (small-eared galago): 100965273
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Entry
100965273 CDS
T07855
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100965273 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oga03021
]
100965273 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
oga03019
]
100965273 (SUPT5H)
Transcription machinery [BR:
oga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100965273 (SUPT5H)
RNA polymerase I system
100965273 (SUPT5H)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
100965273 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
100965273
NCBI-ProteinID:
XP_003802176
Ensembl:
ENSOGAG00000033979
UniProt:
H0XVP6
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMHGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRGVAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVNNFTDG
FSPMSPRISSPMHPSLGGQHGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYI
GVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSG
SRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD
DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGS
YQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPG
GYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEK
VVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL
GKLLEA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaagacagcaacttctccgaggaggaggacagcgaacgcagcagtgat
ggcgaggaggccgaggtagaggaagagcggcggagtgcagctggcagtgagaaggaagaa
gagcctgaggaagaagaggaagaggaggaagaggaggaatatgatgaggaagaggaggag
gaagatgatgaccggccccccaaaaaacctcgccatggtggcttcattctggatgaggct
gatgtggacgatgagtatgaggacgaggaccagtgggaagatggagcagaggacatccta
gagaaagaagagattgaagcttccaatatagacaatgttgtcctggatgaagaccgttct
ggggctcgccgcctccaaaatctctggagggaccagcgagaagaagaactaggcgagtat
tacatgaagaaatatgccaagtcgtcagtgggcgagacggtgtatggaggatctgatgag
ctctcagatgacatcacccaacagcagctgctcccgggagtcaaggatcccaatctgtgg
actgtcaagtgtaagattggagaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacacctctgcaaattaagtcagtagtggcaccagagcac
gtgaagggttacatctacgtggaagcctacaagcagacccacgtgaagcaagccattgag
ggtgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgcttaaagtggtgaaggaggtggccaacctgaaaccaaagtcctgggtccgt
ctcaagcggggcatttacaaggatgacatcgctcaggtggattatgtggagcccagccag
aacacgatctccctgaagatgatcccccgtattgactatgaccgcatcaaggcccgaatg
agcttgaaagactggtttgcaaaaaggaagaagtttaagcggcctccacagaggctgttt
gacgctgagaagatcaggtccctagggggtgatgttgcctctgatggtgatttcctcatc
tttgaggggaaccgttatagccggaaggggttcctgttcaagagcttcgccatgtctgct
gtgatcacagagggtgtgaagcccacactctctgagttggagaagttcgaggaccagcca
gaaggcatagacctggaggtggtgactgagagcacagggaaggagcgggagcacaatttc
caacctggagacaatgtggaggtctgtgagggtgagctcatcaacctgcagggcaagatc
ctcagcgtggatggcaataagatcaccatcatgcccaagcatgaggaccttaaggacatg
ctagagttcccagcccaggaacttagaaagtactttaagatgggggaccatgtgaaggtg
attgctggccgatttgagggcgacacaggcctcattgttcgggtggaggagaactttgtc
atcctcttctctgacctcaccatgcatgagctgaaggtgcttccccgggacctgcagctc
tgctcagagacagcatcaggtgtggatgttggaggccagcacgaatggggtgagctggta
cagctggaccctcagaccgtgggtgttattgtgcgactagagcgggagaccttccaggtg
ctgaacatgcatgggaaggtggtgactgtcaggcatcaggctgtgacccggaaaaaggac
aaccgctttgctgtggccctggactcagaacagaacaatattcatgtgaaagatatcgtc
aaggtcattgatggcccccattcaggccgggagggggagattcgccaccttttccgaggt
gtcgccttcctgcattgcaagaaactggtggagaatgggggcatgtttgtctgcaaggcc
cgccatctggtgctagctggaggctcaaagccccgagatgtgaacaacttcactgatggc
ttttcccctatgagcccccggatcagcagccccatgcaccccagtcttggaggtcagcat
ggtggctttggtagcccaggtggtggcagcggtggcatgagcaggggccgagggcggaga
gacaacgagctcattggccagactgtgcgcatctcccaggggccctacaaagggtacatt
ggtgtagtgaaggatgccacggaatccacggcccgcgtggaacttcactccacctgccag
accatctctgtagaccgtcagcgcctcaccacagtgggctcacggcgcccaggtggcatg
acctccacctatgggcggacacccatgtatggttcccagacgcccatgtatggttctggg
tcccgtacacctatgtacggctcacagacacccctccaagatggcagccgcaccccacat
tatggctcgcagacgcccctgcatgacggcagtcgcactcctgcccaaagtggggcctgg
gaccctaacaaccccaacacaccatcacgggctgaggaagaatatgaatacgcctttgat
gatgagcccaccccatccccacaggcctatggaggaacccccaacccccaaacacctggc
tacccagacccttcatccccacaggtcaatccgcagtacaacccacagacgccagggaca
ccagctatgtacaacacagaccagttctccccctatgctgctccttccccacaaggttcc
tatcagcccagccccagcccccagagctaccaccaggtggcacctagcccagctggctac
cagaacacccattctccagccagctaccaccctacgccttcacccatggcctatcaggct
agccccagccccagtcctgttggctacagtccaatgacacctggcgccccctctcctggt
ggctacaacccacatacaccgggctcaggcattgagcagaactctagcgactgggtaaca
actgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtgggtcagaca
ggtgtcatccgcagtgtcacgggaggcatgtgctccgtgtacttaaaggacagtgagaag
gtcgtaagcatttccagtgagcacctggagcccatcacccccaccaagaacaacaaggtg
aaagtgatcctgggcgaggatcgagaagccacaggtgtcctgttgagtattgatggtgag
gatggcattgtccgtatggatcttgatgagcagctcaagattctcaacctccgcttcctg
gggaagctcctggaagcctaa
DBGET
integrated database retrieval system
