Otolemur garnettii (small-eared galago): 100965467
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Entry
100965467 CDS
T07855
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03013
Nucleocytoplasmic transport
oga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100965467 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
100965467 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100965467 (THOC1)
03041 Spliceosome [BR:
oga03041
]
100965467 (THOC1)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100965467 (THOC1)
Spliceosome [BR:
oga03041
]
Complex C
Other components
EJC/TREX
100965467 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100965467 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
100965467
NCBI-ProteinID:
XP_012657474
Ensembl:
ENSOGAG00000000470
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRTAPE
DFLGKGPSKKLLMGNEELTRLWNLCPDNMEACKSETRQVEKFSHEFCKTAISLYRAVNNS
NYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEED
NDALLKEHESPDVRRDKPVTGEQIEVFATKLGEQWKILAPYLEMKDSEIRQIECDSEDMK
MRAKQLLVAWQDQEGVHATPENLISALNKSGLNDLAESLTNDNETNS
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacaacaaaaatatcaagccattactgagtaccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgatcaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacgccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgatacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcgaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttacgaagattatctaaatcccagaatacagtcttctgtggacgaattcag
ctctttttggccaggcttttccctctatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacactgggtcaa
aagcacactgaggatagagaagaaggaatggatgtagaagaaggggaaatgggagatgat
gaagctccaacaacgtgctccattccaattgattacaacctatatcgaaaattctggtca
cttcaggattactttaggaaccctgtgcagtgctatgagaagatttcatggaaaactttt
ctcaagtattctgaggaagttttggctgtttttaaaagttataagttagacgatactcag
gcctcaaggaaaaagatggaagaactgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgacagtaactttcgtcgacac
atcttgttgcagtatcttattttattccaatatctcaaggggcaagtcaaattcaaaagt
tcaaactatgttttaactgacgaacagtcactttggattgaagatactacaaaatcagtg
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagataccaagcctacaagagtagtgcggaagagaacagccccggag
gacttcctagggaaaggacccagcaaaaaacttctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgacaatatggaagcctgtaaatcagagacaaggcaagttgaa
aaattttcacatgaattctgtaagactgccatctctctttatagggctgtgaacaattca
aattatggttggagagccctgaggcttttagcacggagaagccctcacttcttccagcca
actaatcagcagtttaaaagtttgccagagtatcttgaaaacatggtgataaagctagcc
aaggaattaccacctccttctgaagaaataaaaacaggtgaggatgaagatgaggaagat
aatgatgctttactgaaagaacatgaaagtcctgatgttcggcgagacaaacctgtaaca
ggggaacagatagaagtatttgccaccaagctgggtgaacaatggaagattctggctccc
tatttggaaatgaaagactcagaaattaggcagattgagtgtgatagtgaagacatgaag
atgagagctaagcagctcctagttgcctggcaagatcaagaaggagtacatgcaacaccc
gagaatctgatcagcgcactgaataagtctggattaaatgacctcgcagaaagtctaact
aatgacaatgagacaaatagttag
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