KEGG   Otolemur garnettii (small-eared galago): 100965467
Entry
100965467         CDS       T07855                                 
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
oga  Otolemur garnettii (small-eared galago)
Pathway
oga03013  Nucleocytoplasmic transport
oga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100965467 (THOC1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100965467 (THOC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oga03019]
    100965467 (THOC1)
   03041 Spliceosome [BR:oga03041]
    100965467 (THOC1)
Messenger RNA biogenesis [BR:oga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100965467 (THOC1)
Spliceosome [BR:oga03041]
 Complex C
  Other components
   EJC/TREX
    100965467 (THOC1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100965467 (THOC1)
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 100965467
NCBI-ProteinID: XP_012657474
Ensembl: ENSOGAG00000000470
LinkDB
Position
Unknown
AA seq 647 aa
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRTAPE
DFLGKGPSKKLLMGNEELTRLWNLCPDNMEACKSETRQVEKFSHEFCKTAISLYRAVNNS
NYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEED
NDALLKEHESPDVRRDKPVTGEQIEVFATKLGEQWKILAPYLEMKDSEIRQIECDSEDMK
MRAKQLLVAWQDQEGVHATPENLISALNKSGLNDLAESLTNDNETNS
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacaacaaaaatatcaagccattactgagtaccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgatcaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtaccgcatctacgccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgatacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcgaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttacgaagattatctaaatcccagaatacagtcttctgtggacgaattcag
ctctttttggccaggcttttccctctatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacactgggtcaa
aagcacactgaggatagagaagaaggaatggatgtagaagaaggggaaatgggagatgat
gaagctccaacaacgtgctccattccaattgattacaacctatatcgaaaattctggtca
cttcaggattactttaggaaccctgtgcagtgctatgagaagatttcatggaaaactttt
ctcaagtattctgaggaagttttggctgtttttaaaagttataagttagacgatactcag
gcctcaaggaaaaagatggaagaactgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgacagtaactttcgtcgacac
atcttgttgcagtatcttattttattccaatatctcaaggggcaagtcaaattcaaaagt
tcaaactatgttttaactgacgaacagtcactttggattgaagatactacaaaatcagtg
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagataccaagcctacaagagtagtgcggaagagaacagccccggag
gacttcctagggaaaggacccagcaaaaaacttctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgacaatatggaagcctgtaaatcagagacaaggcaagttgaa
aaattttcacatgaattctgtaagactgccatctctctttatagggctgtgaacaattca
aattatggttggagagccctgaggcttttagcacggagaagccctcacttcttccagcca
actaatcagcagtttaaaagtttgccagagtatcttgaaaacatggtgataaagctagcc
aaggaattaccacctccttctgaagaaataaaaacaggtgaggatgaagatgaggaagat
aatgatgctttactgaaagaacatgaaagtcctgatgttcggcgagacaaacctgtaaca
ggggaacagatagaagtatttgccaccaagctgggtgaacaatggaagattctggctccc
tatttggaaatgaaagactcagaaattaggcagattgagtgtgatagtgaagacatgaag
atgagagctaagcagctcctagttgcctggcaagatcaagaaggagtacatgcaacaccc
gagaatctgatcagcgcactgaataagtctggattaaatgacctcgcagaaagtctaact
aatgacaatgagacaaatagttag

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