Otolemur garnettii (small-eared galago): 100965996
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Entry
100965996 CDS
T07855
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03030
DNA replication
oga03410
Base excision repair
oga03420
Nucleotide excision repair
oga03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100965996 (RFC1)
03410 Base excision repair
100965996 (RFC1)
03420 Nucleotide excision repair
100965996 (RFC1)
03430 Mismatch repair
100965996 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oga03032
]
100965996 (RFC1)
03400 DNA repair and recombination proteins [BR:
oga03400
]
100965996 (RFC1)
DNA replication proteins [BR:
oga03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100965996 (RFC1)
DNA repair and recombination proteins [BR:
oga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100965996 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
RuvB_N
BRCT_2
AAA_17
AAA_16
AAA_14
AAA_18
AAA_33
AAA_5
nSTAND3
AAA_7
NTPase_1
RNA_helicase
TIP49
Motif
Other DBs
NCBI-GeneID:
100965996
NCBI-ProteinID:
XP_003800730
Ensembl:
ENSOGAG00000012292
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDIRKFFGVIPGGKKLGSETVKKNEKTKSAEETLKTKKGIKEIKVNSSSKEDVSKQKQSN
KKKRIIYDSDSESEETTQVKNAKKQPEKLLLSSKLGKILRQDPVTYISETDEDDDFICKK
TASKSKENGGSANSYLGASNVNKNEENTKTKNKPLSPIKLTPTSVLDYFGTRSVQRSDKK
MVASKRKEPPENTDDSGLNDEAIAKQLQLNEDAELERQLHEDEEFARTLAMLDEEPRTKK
GRKETEEGGTFSSVQANLSKAEKHKYPHKVRTEQFSDERKSHSPKTPTKRESLIETQQHS
KPSTPKTGQSSSPKASSKQALMNKKESSYKETEPATSKRKENAIELKGETKTPKKNKSSP
AKKESVSPEDAEKKRSNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESI
ERDEAKSLIERYGGKVTGNVSKKTSYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRT
MPGKKSKYETAFEAEMKKEKSKLEKTPQKNEQGKRKISPTKRESESKKKKLTPKRDISVK
PVPKEMSEFRRGLDFMEQVAEGLKARNLADDSSENKVENLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLRNWHESSSEDKKHATKFGKFAGKDDGSGFKAALLSGPPGVGKTTTASLV
CQELGYTYVELNASDTRSKNTLKAVVAESLDNTSIKGFYSGGAASSGSMKHALLMDEVDG
MAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAM
MSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAGNKALTYDQAKADSHRAKKDI
KLGPFDVARKVFAAGEDTAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMKKH
LMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPSFPSWLG
KHSSTGKHDRITQDLALHMSLKTYSSKRTVNLDYLSHLRDALVQPLTSQGVEGVQDVVAL
MDTYYLMKEDFENIMEISSWAGTPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAVKTLR
HSTGSSLDSEYNEELHEDDSQADEKDQDAIETDAMIKRKTKSSKPSKPDKDESRKGKGKR
LKK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggacattaggaaattttttggagttataccaggaggaaagaaacttggaagtgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaacattaaaaacgaagaaaggaata
aaggaaatcaaggtcaatagttcttctaaggaggatgtctccaaacagaagcaatcaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacaacacaggtaaaa
aatgccaaaaagcaaccagaaaaattgctgttatcttctaaacttggtaaaattttacgg
caggatcctgttacatacatttcggaaacagatgaggacgacgactttatctgtaaaaag
acagcctctaagtcaaaagagaatggaggatctgcaaatagttatcttggagcatcaaac
gtgaacaagaatgaagaaaacactaagaccaagaataagcccttatcaccaataaaactt
acacctacatcagtgctggattattttggaactagaagtgtccaaagatcagataagaag
atggtggcaagcaaaagaaaagagcctccagaaaacacagatgattctggattaaatgat
gaagccatcgccaagcagctgcagcttaatgaagatgcagagctggagaggcagctgcac
gaagatgaagagttcgccagaaccttggccatgttagacgaagagcccaggactaaaaag
ggtcgaaaggaaacagaagagggaggaacattttcatctgtccaagccaatttaagtaaa
gcagaaaaacacaaatatcctcataaagtcagaacagaacaattttcagatgaaagaaag
agccacagtcctaagacgccaactaaacgtgaaagtttaatagaaactcagcaacattcc
aagccatcaactcccaagacaggacagtcctcttctccaaaggccagttctaagcaggca
cttatgaataaaaaagagagctcttataaagaaacagagcctgcaacctcaaaaagaaaa
gaaaatgccattgaattgaaaggagagacaaaaactccgaagaaaaacaaaagttctcca
gccaaaaaagagtctgtaagtcctgaagatgctgaaaagaaacgtagtaattatcaagct
tatcgaagttacttaaatcgagaaggtcccaaagctttgggctccaaagaaataccaaag
ggagctgaaaattgcttggaaggcctcatctttgtaatcacaggcgtgctggagtccatt
gaacgagatgaagccaagtctctcattgaacgttatggggggaaagtaacaggaaacgtc
agcaagaaaaccagctaccttgtcatgggccgggacagtgggcagtccaagagtgacaag
gcagcagccttggggacaaaaattattgatgaagatggcctactgaatctgatccgaact
atgccaggcaagaagtccaagtatgaaacagcatttgaagctgagatgaagaaagaaaag
tccaaattggagaaaacaccccaaaaaaatgaacaaggaaaaagaaaaattagtccaact
aaaagggaatcagaatctaaaaagaagaagctgacgccgaaaagggacatttcggtaaag
ccagtaccaaaggaaatgagtgagttcaggagaggcctggacttcatggagcaggtggcc
gaggggctgaaggctaggaacttggctgatgacagcagtgaaaacaaggtggaaaatttg
ctctgggtggataaatacaagccaacctcccttaagaccatcattggacagcaaggcgac
cagagctgtgccaacaaactcctacgctggcttcgaaactggcatgagagttcctcagaa
gacaagaaacatgcaacaaagtttggtaaattcgctggcaaagatgacggctctggcttt
aaagctgcattactctcagggccccccggtgttggcaaaaccaccacagcttctctggtg
tgccaggaattgggatacacctacgtggaactgaatgcaagtgatactcggagtaagaac
actttgaaggcagttgttgccgaatcactggacaataccagcatcaaaggcttttattca
ggtggagcagcctcttcaggaagcatgaagcacgccctcctcatggacgaggtggacggc
atggcaggcagtgaggacaggggagggattcaggaattaattggcctcataaaacatact
aagatccccattatatgtatgtgcaatgatagaaatcatcctaagatccgctctttggtt
cattattgttttgatcttcgttttcaaagacctcgggttgaacagattaagggtgctatg
atgtctattgcattcaaagagggtttaaagattccccctccagctatgaatgaaataatt
ttgggagccaatcaagatatcagacaggttttacataatctgagtatgtggtgtgcagga
aataaggcgttgacctatgaccaggccaaggctgattctcatagagccaaaaaggatatc
aaactgggcccattcgatgttgcccggaaagtgtttgcggctggagaggacactgctcat
atgtcacttatggataagtcagatctcttttttcatgattattcaatagcacccctgttc
gtccaggagaactacctacatgtgaagcctgtagctgcagggggtgacatgaaaaagcac
ttgatgcttttaagccgagcagcagatagcatatgtgatggtgacttagtggacagtcag
atccggagtaagcaaaactggagtcttttgcccacacaggccatttatgccagtgttctt
cctggagagttgatgaggggctacatgacccagtttcccagctttccgagctggctgggg
aagcactcgtctacaggcaaacatgatcgtatcactcaggacctagcattgcacatgagt
ctcaaaacttactccagcaaaaggactgtaaacttggattatctatcacacctgagggat
gcacttgtgcagcccttgacctcacaaggggtagaaggagtccaggatgttgttgcactt
atggacacgtattatttgatgaaagaagactttgagaatatcatggaaattagcagctgg
gctggcacacctagtcccttttccaagctggatcccaaggtgaaagcagcctttacgaga
gcttacaataaggaagcccaccttactccatattcacttcaggcagtaaagacattgaga
cacagcacaggctcatccctggattctgaatataatgaagagttacatgaggatgactct
caagctgatgagaaagaccaggatgctatagaaactgatgctatgatcaagagaaagaca
aaatcttcaaagccttcaaaaccagacaaagatgagtccagaaaaggaaaagggaaacgt
ttgaagaaatga
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integrated database retrieval system
