Otolemur garnettii (small-eared galago): 100966335
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Entry
100966335 CDS
T07855
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X2
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
oga
Otolemur garnettii (small-eared galago)
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100966335 (HELZ)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
100966335 (HELZ)
3'-5' decay
Other 3'-5' decay factors
100966335 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
zf-CCCH
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
AAA_22
AAA_5
AAA_16
AAA_7
zf-CCCH_4
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
100966335
NCBI-ProteinID:
XP_012658669
Ensembl:
ENSOGAG00000002482
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALKHCTEALLSLGQCSMADFAGPCPLEIERIKIESL
LYRIASFLQLKNYGQADEDCRNVLGEGLAKGDDAFRTVLYCMQLKGKLQPVSAILAKSLT
GESLNGMVTKDLTRLKTLLTETETATCNVLSGYHVEDLDEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGLCRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKSNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDCDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETRILICTHSNSAADLYIKDYLHPYVEAGNP
QARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQ
LDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNL
HVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPL
TFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQV
FRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDST
EDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWERFIALCHENNSLHGI
TFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGSTNKPQQSPPKGKGLHHTQNDH
FQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNVVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVS
IGQPQNPHQEKDQHEQNRNGKSDTNNPGPEINKIRTPEKKPTEPKQVDLESNPQNRSPES
RPGVIYPNTKFPRKDNLNPRHINLPLPAPHAQYAIPNRHFHALPQLPRPPFPIPQQHTLL
NQQQNSLPEQPNQMPPPPNQVVPQQNQLSQQPQQPQQPQQPPQPPPQQPPPQLSPAYQAG
PSSAFFNNAVSHRPQTPPAEAVIPEQQPPPMLQEGHSPLRAIAQPGPILPAHLNNFIDEN
PPALPIGEALDRIHGSVALETLRQQQARLQQWSEHHAYLSQGSIPYPHPHHPHLQHLPQP
PLGLHQLPARADWKLTSSAEDETETTYSRFQDLIRELSHRDQSETRELAEMPPPQSRLLQ
YRQVQTRSPPAVPSPPSGTDHSSHFSNFNDNSRDIEVANNPAFPQRLPPQIFSSPFSLPS
EHLAPPPLKYLAPDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQ
EPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSAPQESLAQCKE
LQDHSSQSSFNFSSPESWVNTTSSAPYQNIPCNGSSRTAQPRELIAPPKTVKPPEDQLKS
ENLEVSSSFNYSVLQHLGQFPPLMPNKQIAESANSSSPQSAGGGKPAMSYASALRAPPKP
RPPPEQAKKSSDPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgaaaagtcatgtgaacaagcatgtgaatcacttaagaggcag
gactatgaaatggccctcaagcactgtacagaggcccttctttctcttggccagtgctcc
atggcagacttcgcggggccttgtccattggagatagaacgcatcaaaattgagagtctt
ctttacagaattgcctcattcttgcaactgaagaactatgggcaagccgatgaagattgt
aggaacgtgttgggagaaggactggccaagggagacgacgcctttcggacggtgctctac
tgcatgcagctgaaaggaaagctccagcccgtgtccgccattcttgccaagtcactgacg
ggagagtccctgaatgggatggtgacgaaggatttgacaagactaaaaacacttctcaca
gaaactgagacagcaacttgtaatgtcctctctggatatcatgtggaagacttagatgag
gggtcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggactctgtaggtatggtgcccagtgtact
tcagcacattcccaggaagaactagcagaatggcaaaaaagatacgcttcccgactgata
aaactgaaacagcagaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaggtggaacataatcctgacctgtcagtcactgtcaacaccaaaaaatctcaccagaca
tggacctttgctctcacttgtaagcctgcaagaatgctgtatcgggtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatctggaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaaaactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctatttacccagtccgttttagacaaatcattgaccaagagcaactatcagtcacggttg
catgaccttctttatattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcaattgcagattctggcaagcttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacagctttttggtcgctttaagcttactgaaacgctttctgaagat
actttggctggacgactggtgatgaccaaagtcaatgccgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttacgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattgtgacacacaggttgaacttcagttccaattgaatcgattacccctc
tgtgaaatgcattatgcactagacaggatcaaggacaatggggttttgtttccagacatc
agtatgactcccaccataccttggagtcccaacagacaatgggatgaacagttggatcct
cgactaaatgcaaaacagaaagaggcagttctggccataaccactccactttctatacag
ctgccgcctgtcctcatcatcggaccctatgggacaggcaaaacgttcacgctagctcag
gccgtcaaacacattctgcagcagcaggagactaggattctcatttgcacccattctaat
agtgctgctgatctctacataaaggattatttacatccctatgtagaagcaggcaatccc
caggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagtt
gtgcatcagtactgtttgatctcaagtgcacattccacctttcagatgccacagaaagaa
gatattcttaaacatcgagtggttgttgttacgttgaacacttcccagtacctctgtcaa
ttggaccttgaacctgggttttttacccatattttattagatgaagctgcccaagccatg
gagtgtgaaaccattatgcctctagcattagcaactaaaaacactcggatagtcttggct
ggtgatcacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaacctc
catgtttccttacttgataggctctatgagcattaccctgctgagtttccatgtaggatc
ctcttatgtgagaactaccgctctcatgaagctatcatcaattacacctctgagcttttc
tatgagggcaaattgatggccagtggaaagcagccagcacacaaggatttctacccactc
actttctttacagcacgaggggaagatgtacaagaaaaaaatagtacagctttttataat
aatgcagaggtgtttgaagtggtggaacgtgtagaagaattaagaaggaagtggccggta
gcatgggggaagttagatgacggcagtattggtgtggtgactccatatgctgatcaagtg
ttcaggatacgagctgaacttcggaaaaagcgactgtctgatgtgaatgtggaaagggtg
ctaaatgtgcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaagacat
acttgtaaacataaacagactccaattaaaaagaaagaacaacttctggaagattccacg
gaggacttagattatggttttttgtctaactacaagcttctcaatactgccatcacgaga
gcacagtccctggttgctgtggtgggcgaccccattgctctgtgctctgttggacgatgc
aggaaattttgggagcggtttattgccctgtgtcatgaaaacaatagtctacatggaatc
acttttgaacagatcaaggcccagttagaggctttagaactaaagaagacatacgtgctg
aatccactggcacctgaatttatcccccgggctctaagactgcagcattcagggagtacc
aacaaaccgcagcaatcaccaccaaaggggaaaggcctccatcatacccagaatgatcat
tttcagaatgatggaattgttcagcccaatccttccgtacttattggcaatcctattaga
gcatatactcctccaccccctcttggacctcacccaaacttgggaaaatctccaagccct
gttcaaagaatagatcctcatactgggacaagtattctttatgtacctgctgtctatgga
gggaatgtagttatgtcggtgcctttacctgtaccatggacaggataccagggtaggttt
gcagttgatcctcgaattattacacatcaggcagcgatggcctataatatgaacctatta
cagacgcatggacgggggtctcctatcccttacggccttggacatcacccacctgtcagc
atagggcagccacagaatccacatcaggaaaaggatcaacatgagcaaaatcgaaatggt
aaaagtgatacaaataatcctggacccgaaattaataagattcgaacaccagagaaaaag
cctacagagccaaaacaggttgatttggaatcaaatccacagaacagaagtcctgaatca
cgtcctggtgttatttatcccaataccaaatttcctcgcaaagataatctcaaccccaga
cacataaatctgccccttcctgctccccacgcacaatatgcaatccctaatcgtcatttc
catgcccttccccagctaccaagaccgccattcccgattccacagcagcacaccttgtta
aatcagcagcagaatagtttgcctgaacaaccaaatcaaatgccacctccaccaaatcag
gtagtccctcagcagaatcagctgagccagcagccccagcagccgcagcagcctcagcag
cctccgcagccaccacctcagcagccaccgcctcagctttctcctgcgtatcaggcagga
cccagcagtgctttctttaataatgcagtttctcatcgaccacagactcctcctgcagag
gctgtgattcctgagcagcagcccccgcccatgctgcaagaaggccacagccctctgaga
gccattgcgcagcccggccccattcttcctgcacatctgaataacttcattgatgagaac
cccccagcattacctataggagaggcattagatcgaatacatgggagtgtggctctggag
acgttaaggcagcagcaggcacggctgcagcagtggagcgagcaccacgcctatctcagc
cagggcagcatcccgtacccgcaccctcaccaccctcacctccagcatcttcctcagcca
cccctcgggttgcatcagctgccagcgagggcagactggaagctcaccagcagtgccgaa
gatgaaacagagacaacgtattcaaggtttcaagacttaatcagagaactgtctcatcgt
gatcaaagtgaaacgcgggaactagctgaaatgccaccacctcaatcaagacttttgcaa
tacagacaagtgcagactaggagcccaccagcagtcccgtctcccccgtccggtacagac
cacagtagccacttttctaactttaatgacaacagcagagacattgaagtagccaacaac
ccagcatttccacagcgcctcccaccccagatattcagctctcctttttcgttgccatct
gaacaccttgccccacctcccctgaaatacctggcacctgacggagcatggacttttgct
aacttgcagcagaatcacctaatggggcctggctttccctacggcctacctccactgcct
cacaggccaccacagaacccttttgtacaaatacagaatcatcaacatgctattggtcaa
gagccatttcacccactgtcatctcgaacagtatcttcttcttcgctccctagcttagaa
gagtatgagcccagaggacctggtcggcccttgtaccaaagaagaatttcatctagctca
gtccagccttgttctgaagaagtaagcgctcctcaagagagtctggctcagtgtaaagag
cttcaggaccacagtagccagtcttctttcaacttctcatccccggagtcctgggtaaac
accacctcatctgctccctatcagaacattccgtgcaatggatccagcaggacagctcag
cccagagagttgatagctccacccaagactgtcaaaccccctgaggatcagctgaagtca
gaaaacctcgaggtgtccagttccttcaactacagcgtgctgcagcatctcggccagttc
ccacccctcatgcccaacaagcagattgcggagtcggccaacagcagcagcccccagagc
gctggtgggggcaagcccgccatgtcctatgctagcgctctaagggcccctcccaagccc
aggccccctcctgagcaggccaagaagagtagcgaccctctgtctctgttccaggaactc
agcctggggagctcgtcaggcagcaatggcttttactcctattttaaataa
DBGET
integrated database retrieval system
