Otolemur garnettii (small-eared galago): 100967205
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Entry
100967205 CDS
T07855
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100967205 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oga03019
]
100967205 (PNLDC1)
Enzymes [BR:
oga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100967205 (PNLDC1)
Messenger RNA biogenesis [BR:
oga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100967205 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
BT_MCC_alpha
Motif
Other DBs
NCBI-GeneID:
100967205
NCBI-ProteinID:
XP_023370430
Ensembl:
ENSOGAG00000007331
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MDVGADEFEQSLPLLEELVLGADFVGLDIEFTGLRSNLTGPQQISLFDLPSEWYLKTRQS
VQQFTICQIGLSVFSSMEGESNKYVAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
DYNKFLKNGIPYMNEEQEKKIKHNILCGNWRVRSALDKDQIKVVIDEVTRWLQLAEEGDW
LTLPGIAGFQAFEVQLVLRQALPNIWTVQREEGVVVKKVSKQHRWYLENTSCDRASCWRE
KILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPV
IIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTKNSGPVIVHSNSCEKYVQMKCPH
EAAYDAFLCGSVLLKVAHLLLERMQGRVRGIDPISESTFPQYLDVLAPYVNQVNLIRAGV
PKINFSGPDYPSIRPPILILSVSKWPGVTEQQVYREFQNLCKFDVRRLTRSQFLLLTNKF
KDARNILKEYRSHPTLQVSLYRYWRHSPNVNCLLQVCGIVTTWALLTFILGRSCP
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgcggatgagttcgagcagagccttcctctgttggaggagctcgtcctc
ggcgccgacttcgtgggtctggacatagagttcactggccttcgttctaacctgactggg
ccccaacagatcagtctttttgatttgccgtcggagtggtatctaaagacccgtcagagt
gttcagcaatttacaatctgtcagattgggctgtctgtgttttccagcatggaaggagag
tcaaacaagtatgtagcccattcgtgtaacttctttctcttccctacaacatttgggatt
ttggattcagaattctctttccaggcttctagtgttcagtttttgaatcagtatggcttc
gactacaacaagtttctcaaaaatggaatcccatatatgaatgaagaacaggaaaagaaa
atcaagcacaatattctgtgcgggaactggagagttcgcagtgctctagataaagaccaa
atcaaggtggtaattgatgaagtgacacggtggctgcagctggctgaggagggcgactgg
ttgactcttcctggtattgctgggttccaggccttcgaggtccagttggtgctgaggcag
gccctccccaacatctggacggtgcagagagaggaaggggtggtagtgaagaaagtgagt
aaacagcatcgctggtaccttgagaacacctcttgtgatagagcgagctgttggagggaa
aagattcttctctctgcgaggggtttttctgtctttttccaaatgctggtgaaagctcag
aagcccttagtgggacataacatgatgatggatctgctgcacctccacgagaagttcttc
agacctctcccagaaagctacgatcaatttaagcagaacatccacagcctgtttcctgta
atcatcgataccaagaatgtaacaaaggacatctggaaggaactgaatttcccacgggtt
tcaaatctttccgaagtgtacgaagtcctgaacagtgacttgaatcccaccaagaattct
ggaccagtgattgttcactcaaacagctgtgaaaaatatgtccagatgaagtgcccccat
gaagctgcgtatgacgccttcctttgcggctcagttcttttgaaagtggcacacttgctc
ctggagaggatgcaggggagggtgcgtggcatcgatcccatatctgagtccacctttcct
cagtaccttgacgtgctggccccctatgtgaaccaagtgaatcttatccgagctggggtc
cctaaaatcaatttttctggtccagactatcccagtatccgacctcccatcctcatcctc
agtgtcagcaagtggcctggggtcactgagcagcaagtctaccgtgagtttcagaacctc
tgcaagtttgatgtcaggcgcctcacacggagccagttcctgctcctgaccaataagttc
aaggatgctcggaacatcctgaaggagtacaggagccatccgaccctgcaggtctccctg
tatcggtactggcgacactccccaaacgtcaactgtctgctacaagtctgtggcatagtg
accacctgggccctcctgacgtttatcctgggacgatcctgcccctga
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