Otolemur garnettii (small-eared galago): 105886818
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Entry
105886818 CDS
T07855
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
oga
Otolemur garnettii (small-eared galago)
Pathway
oga04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
oga00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
105886818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oga03000
]
105886818
Transcription factors [BR:
oga03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
105886818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
105886818
NCBI-ProteinID:
XP_012659535
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MPPTLAQRLWEPDDGVVLAFLARLARLRLQSALHLDGQQLLAKEERNVPDNSRGPTAGAR
GSLCLRDWLVAQIESGCYPGLHWEDTGKTLFHSPWKHIAKQCYQVQKDTVLFRAWAVYKG
KHLEDTNREDLSTXALHCALNKSADFCKVCECSQLDVSNPYKVYRIVPSNAVGPVAEACA
PFEEWGIPSSQQEPPGEATEPTCGADQDGSRLITEDEDKEQPHRLAQRGSLPPAALFPGP
LADHRYYAGNPKHPWRVMPSEHYSNPGCWLHVQVFYRSALVQEATARTAEGCSQSPRAAA
AAAFAERLLEPSPPVAQVCFPEPPPGAHVLQRLLWHLERGLRLWVAPEGVFAKRLCEGLV
YWRGRLAPHRAQPNKLERQSTCQLPDTRXFLEELCAHLQDGHSEPEYQIHLCFGEEYSVP
LDQPEERLVTAHVEPVFTRELLLHSKGLGSCRLLGSSHGIPHGITHLLTKPSQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaacactggcccagaggctgtgggagcccgacgacggcgtggtccttgccttc
cttgcccgccttgctcgcctgcgtctgcagtcagcactgcatcttgatggccagcagctc
ctggcaaaagaggagagaaatgtccctgacaacagcagaggacccacagcaggagccaga
ggttccctgtgcctacgagactggctggtggcacagattgagagtgggtgctacccaggg
ttgcactgggaggacacaggcaagaccctcttccacagcccctggaagcacatagccaag
cagtgctaccaggtccagaaggacacagtgctcttcagggcctgggctgtgtacaagggc
aagcacctggaggacaccaacagggaggacctctccaccnntgcgctccactgcgccctc
aacaagagtgctgacttctgcaaggtgtgtgagtgcagccagctggacgtctccaacccc
tacaaggtctacaggattgtgcctagcaatgctgttggcccagttgctgaggcctgtgct
ccctttgaagagtggggcattccctccagccagcaggagccccctggagaagcgactgag
cctacctgtggggcagaccaggatggctccagattaatcacagaagatgaggacaaggag
cagccacacaggctggcccagcgaggctcattgccaccagctgccctcttcccaggccct
ttggctgatcacaggtactatgcagggaaccccaaacacccctggagagtgatgccctct
gagcactacagcaaccctggctgctggctgcacgtgcaagtcttctaccgctcggcgctg
gtgcaggaagccaccgcgcgcaccgccgagggctgcagtcagagcccgagagcagccgcg
gccgccgccttcgccgaacgcctgctggagccatcaccacctgtcgcccaagtttgtttc
ccagagccgccgcccggcgcccacgtgctgcagcgcctgctgtggcacctagagcgcggc
ttgcggctgtgggtggcgcccgagggcgtgttcgccaagcgcctgtgcgagggcctggtg
tattggcgtggccggctcgccccgcaccgcgcgcagcccaacaagctggagcgccagagc
acctgccagctgcctgacacgcgctgattcctggaagaactatgcgcccatctgcaggat
ggccactcggagccagagtaccagatccatctgtgctttggcgaagagtactcggtccct
ctggaccagccggaagagcggctggtcacggcccacgtggagccagtcttcaccagagag
ctcctcctgcactccaagggcttgggctcctgccgcctgctgggttcttcacatggcatt
ccccatggcatcacccaccttctgacaaagcccagtcagccctaa
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