Oryza glaberrima (African rice): 127752726
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Entry
127752726 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127752726
KO
K13091
RNA-binding protein 23/39
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127752726
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
General mRNP proteins
127752726
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
DUF6801
RRM_7
Motif
Other DBs
NCBI-GeneID:
127752726
NCBI-ProteinID:
XP_052134086
UniProt:
I1QUW5
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All DBs
Position
10:15451269..15459063
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AA seq
562 aa
AA seq
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MEFDEYEYLEKTVEPSAPSTNGSGEKDRAGSRRRSSGGGRDDEERGSKRSRSGEDRDRDR
DRHHGGGGGREHRDRDDGKEKERSSRSRGKDGEKDRGKDGEKDRSKDAEKDRSRDRDRDS
ERDRRRERDSGRERRSSSRPERRRTEEEEMVRELQKERERSDRNRDYRDRDVRRRKDDGA
EPEADPERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFY
DAMSVPMAIALTGQVLLGQQVMVKPSEAEKNLVQSNVASGGIASGGARKLYVGNLHSNIT
EDQLRQVFEPFGQVELVQLPVDPLTGLCKGFGFIQFARLEDAKAAQSLNGQLDIAGRVIK
VSAVTEQAGLQVGGATTGDLDDDEGGGLALNASSRAMLMRKLDRSGTATSITGGIGIPGV
NTSVELPSASVTGAPLPTTSLIQPTIPAIGTVPGIQIPGTQSADIGSPTEFLLLKNMFDP
AVETDPDFDLDIKDDVQDECSKFGAVNHIFVDKNTAGFVYLHFDSVAAATAAQRALHGRW
FAGKMITATFMTAQQYKMKFPN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtacctagagaagacggtcgagccctccgcgccgtcgacc
aacggctccggcgagaaggaccgcgccggctcccgccggcgctcctccggcggcggccgc
gacgacgaggagcgcgggtcgaagcgctcacgctccggggaggaccgggaccgggaccgt
gaccggcaccacggcggcggcggcggccgggagcaccgggatcgggatgacgggaaggag
aaggagaggagcagccgcagccgcggcaaggatggggagaaggataggggcaaggatggg
gagaaggataggagcaaggacgcagagaaggataggagcagggacagggacagggacagc
gagagggacaggcgcagggagagggatagcgggagggaacgaagaagcagcagccgccct
gagcgtcgccgcacggaggaggaggagatggtgagggagctccagaaggagcgcgaacgc
agcgaccgcaaccgtgactaccgtgaccgcgatgttagacgtaggaaagatgacggtgca
gagccagaagctgatccagaaagagatcaaaggactgtatttgccttccagctatctttg
aaggcagatgaaagagacgtctatgagttcttctcaagagcagggaaggtccgtgatgtt
cgccttattatggacaggaactcgcggcgttccaaaggagttgggtacattgagttctat
gatgctatgtctgttccaatggcgatagctctaactggtcaggtgcttcttgggcaacaa
gtgatggttaagccctcagaggctgaaaagaatctagttcagtcaaacgtggcatcaggt
ggaatagcttcaggtggagcaagaaagttgtatgttggcaacctacattccaatatcact
gaggatcaattgagacaggtattcgaaccatttgggcaagtggagcttgtccagctgccg
gtagatccactaaccgggctatgtaaaggtttcggtttcatccagttcgcacggcttgaa
gatgcaaaagctgctcagagtttaaatggtcagcttgatattgctggaagagtaattaag
gtctcggctgttactgagcaagctggtttgcaagttgggggtgcaactacgggagattta
gatgatgatgaaggtggaggtttggcattaaatgcaagctctagagctatgctgatgcgt
aaattggaccggagtggcactgcaaccagcataactggtggtattggtattcctggtgtg
aacacatctgttgagttaccgtctgcatcggttactggtgctcctctgccaaccacttca
ctcatacaaccaacaatacctgctattggaacagttcctggcatacaaattcctggtact
caatctgcagatattggttcacctactgagtttctattgctgaagaacatgtttgaccct
gcagtggagacagatcctgattttgatttggatattaaagatgatgtccaggatgaatgc
tcaaagtttggtgcagtaaatcacatttttgttgacaaaaatactgctggctttgtgtac
cttcatttcgacagtgtagcagctgcgacagctgctcaacgcgcactgcatggtagatgg
ttcgcaggaaagatgattacagcgacctttatgactgctcagcagtacaaaatgaagttc
ccaaactag
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