Oryza glaberrima (African rice): 127752836
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Entry
127752836 CDS
T08853
Name
(RefSeq) homeobox-leucine zipper protein ROC3
KO
K09338
homeobox-leucine zipper protein
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127752836
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
127752836
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Cupin_8
Motif
Other DBs
NCBI-GeneID:
127752836
NCBI-ProteinID:
XP_052134231
UniProt:
I1QW81
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Position
10:complement(22099999..22105708)
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AA seq
882 aa
AA seq
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MRRMFGDCQVLSSMAAMAGASSSADALFASPLIPNPALAGFMSSSAAMPFHHFSNAAATL
IPKEEGLMGGLHVAKDEEMDLEMDMELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPP
DAAQPSGAAGGNAKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKF
WFQNRRTQMKAQQDRADNVILRAENENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEE
QQLRIENARLKDELDRLACIATRYGGGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVY
SRHFAEQAPVMGCGDLIPPPVVPQHDGAAAYMGAMMAPVQEQDKQLVVDLAATAADQLAR
MCRAGEPLWVRQRGAEVMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSIN
LVDAFLDANKWMELFPSIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAARE
VVFFRYCVHNADEGSWAIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWV
EHMQMVGEEKPLQPVFRDYVASGAAFGATRWLSILQRQCERLASELARNIADLGVIRTPE
ARTNMMKLSQRMITTFCANISASGTQSWTALSDSTQDTIRVTTRKNTEPGQPSGVILTAV
STSWLPFTHQQVFELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASN
SSQNVELLLQESSTHPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPS
PAAAPTISSSTTTTTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVP
SAKLNLSSVTAINSLVCNAIHQITAALKGSAGGAGGEPASDQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggatgttcggggactgccaggtcctgtcgtccatggccgccatggccggggcc
tcctcctccgccgacgcgctcttcgcctcgccgctcatccccaaccccgctctcgccggc
ttcatgtcctcctccgccgccatgcccttccaccacttctccaacgccgccgccacctta
atacctaaggaggaggggttgatgggcggcctccatgtggccaaggacgaggagatggac
ctcgagatggacatggagctcagtggcggctccggcagcgcccacctcgacggcctcctc
agcttcgccgacgtcgacgacgaccacaagccgcagcacagcggccatgaccagccgccc
gacgccgcccagcccagcggcgccgcggggggcaacgccaagaagaagcgctaccaccgc
cacacggcgcaccagatccagcagatggaggcgctgttcaaggagtgcccgcatccggac
gacaagcagcggctgaagctgagccaggaactgggcctcaaacctcgccaggtcaagttc
tggttccagaatcgccggacccagatgaaggcgcagcaggacagggcggacaacgtgatt
ctgcgcgcggagaacgagaacctcaagagcgacaacttccgcctccaggccgccatccgc
aacgtcgtctgccccaactgcggccacgccgccgtcctcgccgacatgtcctacgaggag
cagcagctccgcatcgagaacgccaggctcaaagacgagcttgaccgcttggcctgcatc
gccacccgctacggcggcggcggcggacggcagccggtgctgtcgacgtcggccctgagc
tgcatctcggcgccgccgccggtcctcatgccaccgctcgacctcgacatgaacgtctac
tcgcggcacttcgccgagcaggcgccggtcatgggctgcggcgacctcatcccgccaccc
gtcgtgccgcagcacgatggcgcggcggcgtacatgggcgccatgatggcgcccgtgcag
gagcaggacaagcagctggtggtcgacctcgccgccacggcggcggaccagctcgccagg
atgtgccgcgccggcgagccgctgtgggtgcggcagcgtggcgcggaggtgatggccgtg
gaggagcacgcgcggatgttcagctggccggtggacggcgcgaagcagggagacggcggc
gcggtggcgagggcggaggggacgcgtgacaacgcggtggtcatcatgaacagcatcaac
ttggtggacgccttcctcgatgcgaacaaatggatggagctgttcccgtcgattgtttgc
aaggcaagaacaatccagatcataaaccacggagctgcgtctggtcacctcggcagtgga
actctcctcttgatgcaagcagaggtgcagttcttgtcgcctctggtggcggcgcgcgag
gtggtgttcttccgttactgcgtgcacaacgccgacgaggggagctgggcgatcgtggat
ttcccggcggaagggtttgaggaggggctcctccaagcctcggtggtcaggtgccggcgg
cggccgtccggctgcatcatccaggacatgcccaatggatactccagggtggtgtgggtg
gagcacatgcagatggtcggggaggagaagccgctgcagccggtgttcagggactacgtc
gccagcggcgccgccttcggggccacgcgctggctctccatcctccagcgccagtgcgag
cgcctcgccagtgagctcgcccgtaacatcgccgacctcggagtgatccgcacccctgag
gcaagaacaaatatgatgaagctgtcgcagcggatgatcaccactttctgtgctaacatc
agtgcttctggaacccaatcttggacggccctctcggattcaacccaggacactatcagg
gttacaactcggaagaacactgagcccggacagcccagcggtgtcatcctcaccgctgtc
tccacaagctggcttccttttacccatcagcaggtgtttgagcttcttgcagatgaacaa
cagcgctgccagcttgagattttgtcaaacggcggctcccttcatgaggtggcacatatt
gcaaatggatcacatccaaggaattgcatctctcttcttcgcattaacgctgcaagcaac
tcgtcacagaatgtggagctcctgctgcaggagagcagcacccaccctgatggtgggagc
ctggtggtgttcgcgacggtggacgtggacgcaattcaggtgacgatgagcggcgaggat
ccttcctacatccctctcctccccctgggcttcgccatcttccctgccaccagcccatca
cctgctgctgcacccaccatcagctcaagcaccaccaccaccactggcaatggcaatggc
gaaaccagtagcactcctccaagaaacagcagcagcaacaacaacaatgcagatgagctg
ctgcctcccaatggctgcctcctcaccgtcggcatgcaggtgctggccagcgccgtacct
tctgccaagctcaacctctcgagtgtcactgcgatcaacagccttgtctgcaacgccatt
caccagatcacagctgcactcaaaggttcagcaggtggtgctgggggtgagccggcgtcc
gatcagtag
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