Oryza glaberrima (African rice): 127752938
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Entry
127752938 CDS
T08853
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127752938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127752938
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
SR proteins
127752938
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127752938
NCBI-ProteinID:
XP_052134360
LinkDB
All DBs
Position
1:11009242..11015175
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AA seq
258 aa
AA seq
DB search
MSRRNSRTIYVGNLPGDIREREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADD
AICCRDGYNFDGYRLRVELAHGGRGQSYSYDRPRSYSSGRRGGVSRRSEYRVMVTGLPSS
ASWQDLKDHMRRAGDVCFSDVYREAGATVGIVDYTTYEDMKYAIRKLDDSEFRNAFSRAY
IRVREYDDRSRSRSRSYSRSRSYSRSRSPKSISRSPSPVDERSISRSRTPVSSPSRGRSV
SKSPSRSLSRSPSPVKSD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacgcaacagccgcaccatctatgtaggcaatctccctggggacattcgtgag
agggaggttgaggatctcttttacaagtacggtcgcattttggacattgacttgaagatt
cctccaagacctcctggttatgcttttgttgagtttgaggatccccgtgatgctgatgat
gcaatttgctgccgtgatgggtataactttgatggctacaggttgcgggtggaattagct
catggtggaagaggtcaatcttactcatacgatcgcccaagaagctatagcagtggacga
cgtggaggtgtttctaggcgttctgaatatcgcgttatggtcactggcttaccttcatcg
gcatcatggcaggatcttaaggaccatatgcggcgggctggtgatgtctgcttctctgat
gtataccgtgaggctggagcaaccgttggaattgtggattatacaacctatgaagacatg
aagtatgcgattaggaagcttgatgactcagagttcagaaatgcattttcacgggcatat
atcagggtgagggagtatgatgatagatcaagaagcagaagccgctcttactcaagaagt
cgtagttacagcaggagcaggagtccaaaatctatttctcggtcaccgtcacctgtggat
gaaagatcaatatcaagatcacggactcctgtttcttcaccttctcgtggaagatctgtt
agtaaaagcccaagcaggagcttatcccgctctccctctccggtgaagtctgattga
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