KEGG   Oryza glaberrima (African rice): 127753164
Entry
127753164         CDS       T08853                                 
Name
(RefSeq) ras-related protein RABF1-like
  KO
K07887  Ras-related protein Rab-5A
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04144  Endocytosis
ogl04145  Phagosome
ogl04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    127753164
   04145 Phagosome
    127753164
   04148 Efferocytosis
    127753164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127753164
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogl04147]
    127753164
   04031 GTP-binding proteins [BR:ogl04031]
    127753164
Membrane trafficking [BR:ogl04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    127753164
 Endosome - Lysosome transport
    127753164
Exosome [BR:ogl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127753164
  Exosomal proteins of other body fluids (saliva and urine)
   127753164
  Exosomal proteins of colorectal cancer cells
   127753164
  Exosomal proteins of bladder cancer cells
   127753164
GTP-binding proteins [BR:ogl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    127753164
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU RsgA_GTPase ATPase MMR_HSR1 AAA_7 TniB AAA_16
Other DBs
NCBI-GeneID: 127753164
NCBI-ProteinID: XP_052134595
UniProt: I1QUX6
LinkDB
Position
10:15538643..15542100
AA seq 250 aa
MLRVPEQLSHRSSCNLRAETHLHPVAGLPPPPPPLAHLRLTRPPAPPDPPAMGCSSSLPA
NNAGGVGTISNENSGTDPKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFL
SQTLALEDSTTVKFEIWDTAGQERYAALAPLYYRGAGAAIVVYDITSSESFNKAQYWVKE
LQKHGSPDMIMALVGNKADLHDNRSVSSQDAQEYAERNTMFFIETSAKTADNINQLFEEI
AKRLPRPTPS
NT seq 753 nt   +upstreamnt  +downstreamnt
atgctgcgtgtccccgagcagctgtcgcacagaagcagttgcaacctgcgagcggaaacc
cacctccaccccgtcgccggcctgccgccgccgccgccgccgcttgcccacctccgcctt
actcggcctccggcgcctcctgaccccccggccatgggttgctcttcgtctctgccagct
aataatgctggaggggtaggtactatcagcaacgagaattctggtactgatccgaagaac
ttgcgagtgaagttggtattgcttggagattcaggtgttgggaaaagttgcattgttctt
cgctttgtccgtggtcagtttgaccccacttcaaaggtgactgttggtgcatcatttttg
tcacaaacattggcgttggaggattccacaacagtaaagtttgaaatatgggatactgct
ggtcaggagaggtatgctgcattggcacctctttactaccggggagctggtgccgcaatt
gttgtgtatgacataacaagttcagaatcatttaacaaggcacaatactgggtgaaggaa
cttcagaaacacggtagtccagatatgatcatggctttggttggaaataaggctgatcta
catgacaatcgtagtgtatcctctcaggatgcacaagagtatgcagagaggaacactatg
tttttcatcgagacatcagcgaaaacggctgataacataaaccaactattcgaggaaatt
gcgaagaggttgcccaggccaacaccatcctga

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