Oryza glaberrima (African rice): 127753439
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Entry
127753439 CDS
T08853
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00450
Selenocompound metabolism
ogl00970
Aminoacyl-tRNA biosynthesis
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
127753439
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127753439
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127753439
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127753439
Enzymes [BR:
ogl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
127753439
Amino acid related enzymes [BR:
ogl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127753439
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127753439
Prokaryotic type
Other AARSs
127753439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
127753439
NCBI-ProteinID:
XP_052134881
LinkDB
All DBs
Position
10:13198258..13202259
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AA seq
605 aa
AA seq
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MAAAKEAVVPVEGRRNVLVTSALPYVNNVPHLGNIIGCVLSADAFARYCRLRGHNVLYVC
GTDEYGTATETKAMEEGCSPREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDI
FLKLLDNNWLSENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNS
TELVNPKCKVCGSTPCVRDTDHLFLELPLLREKLEKYIDETSVTGSWSQNAIHATNAWLK
EGLKPRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYISITACYTPEWEKWWKNPENVE
LYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKTKGIGVFGNDA
KSTNIPPEVWRYYLLTNRPEASDTLFTWTDLQAKCNNELLNNLGNFINRVLSFIAKPEGT
GYGSVVPDSPDVDSHALTQSLAETVGKLIDQYIDAMDKVKIKQGLKIAMAISSEGNAYLQ
ESQFWKLYKQDPASCATVMKTSVGIVYLLACLLEPFMPTFSKDVLQQLNLSPEEHLSFCD
EKGEVEKAKRPWDLIPSGHRIGKPAPLFKGLENEAVKGLREKFAGSQAERKLRTQVAAQL
EATSI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgaaggaggcggtggtaccggtggaggggcggaggaacgtgctggtgacg
agcgcgctgccgtacgtgaacaacgtgccgcacctggggaacatcatcggctgcgtgctc
tccgccgacgccttcgcgcgctactgccgcctccgggggcacaacgtgctctacgtctgc
ggcaccgacgagtacggcaccgccaccgagaccaaggccatggaggaaggctgctccccc
agggagatctgcgacaagtaccatgccatccacaaggaagtgtacgagtggttcgacatc
agcttcgacatcttcggtagaacatcgtcgccgcaacagaccgaggtctgccaagacatc
ttcctcaagctactggacaacaattggctgtcagagaacacaatgcagcagctttactgc
aattcatgccaaaggttcttggctgacaggcttgtggagggctactgccccacagaggga
tgcaactatgactctgccaggggtgaccaatgcgagaagtgtggaaaattgctgaattca
actgagctggttaatcccaagtgcaaggtttgcgggagcacgccttgtgtccgcgacacg
gatcacttgttcttggagctccctctgctgagggagaaacttgagaagtatatcgacgag
acttctgtgactggatcatggagccaaaacgctattcatgcaacaaatgcttggttgaag
gaagggttgaaacctcgctgcattaccagggatctgaaatggggtgtgcctgtcccacat
gagaagtacaaagacaaggtgttctatgtctggtttgatgcaccaatcgggtacatctcc
attacggcgtgctacacgcctgagtgggagaaatggtggaagaatccagaaaatgttgaa
ttgtatcagttcatgggtaaagacaatgtcccattccatacggtcatgttcccctccaca
ctacttggaactggagaaaattggactctgatgaagacgattagtgtgacagagtatctc
aattatgaatcaggaaagttctccaaaacaaagggcattggagtgtttgggaatgatgca
aaatccacaaatattcctcctgaagtgtggcgatactacttgcttaccaatcgtcccgag
gcatcagatacattgttcacttggacagatttgcaagccaagtgtaacaacgagctgctg
aacaatttagggaacttcatcaatcgagtactaagctttattgcgaaaccagagggaact
ggatatggttctgttgtacctgattctcctgatgtggattcccatgctctgactcagtca
ttggctgagactgttggtaaattgattgatcagtacatcgatgcaatggacaaggtcaaa
ataaaacaagggctgaagattgcaatggcaatttctagcgaaggaaatgcatacctacaa
gagagtcagttttggaagctttacaaacaagatccagccagttgcgcaactgtgatgaaa
acctcagttggaattgtgtacctcttggcatgtttgctggagcctttcatgccaacattc
tcaaaagatgttctgcagcagctaaatctaagtccagaagagcacctatcattttgtgat
gaaaaaggagaggttgagaaggccaaaagaccttgggatctcataccatcaggccacagg
atagggaaacctgcacctttgttcaagggattggaaaacgaagcggtgaagggcttgaga
gaaaaatttgcaggcagccaagctgagagaaaattgaggactcaagtcgccgcacaattg
gaagccacaagcatatag
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