Oryza glaberrima (African rice): 127753680
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Entry
127753680 CDS
T08853
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127753680
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127753680
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127753680
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127753680
03041 Spliceosome [BR:
ogl03041
]
127753680
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127753680
Protein phosphatases and associated proteins [BR:
ogl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
127753680
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127753680
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127753680
Spliceosome [BR:
ogl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127753680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
127753680
NCBI-ProteinID:
XP_052135057
LinkDB
All DBs
Position
1:complement(12990423..12995384)
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AA seq
325 aa
AA seq
DB search
MMMTRASMGAMEGAAVDEVVRRLVEGGRGGRQVQLSEAEIRQLCVEAKRVLLSQPNLLRI
HAPVKICGDIHGQFVDLLRLFDLGGYPPTSTYLFLGDYVDRGKQSLETICLLLAYKVKYP
DKIFLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFCDCFNCLPMAALIDDKILCMHGG
LSPELNSLDQIKDIERPSEIPDYGLLCDLVWSDPSPDSEGWGESDRGVSCTFGADKLVEF
LEKNDLDLICRAHQVVEDGYEFFAQRRLVTIFSAPNYCGEFDNAGALLSIDESLMCSFQI
LKPNDTGAPHSRKPTSNKTPKTGNA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacgcgggcctcgatgggggcgatggaaggcgcggcggtggacgaggtggtg
cgacgcctcgtggagggcgggcgcgggggcaggcaggtgcagctgtcggaggcggagatc
cggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcatc
cacgcccccgtcaagatctgcggtgatatccatgggcaatttgttgatcttctgaggctg
tttgatttgggcggttatcctccaacttccacttatcttttccttggagattatgtggac
agaggcaaacaaagcttggaaaccatatgcttgcttctggcatacaaagtgaagtatcct
gataagattttcctgttaaggggaaaccatgaagatgcgaaaattaacagagtgtatggt
ttctatgatgaatgtaagaggcgattcaatgttcgactgtggaagattttctgtgattgc
ttcaactgcttgcctatggcagcactcattgacgataagatactctgcatgcatggtggc
ctctcacctgaactgaatagcttggatcaaataaaggatatcgagaggcccagtgagatt
cctgactatggtcttttgtgtgatttagtttggtctgatcctagtcctgactcagaaggg
tggggggagagtgacagaggtgtttcctgcacttttggtgcagataagcttgtagaattt
ttggagaagaatgatcttgatcttatatgccgcgctcatcaggttgttgaggatggctac
gagttctttgcgcaaaggagattagtgacaatcttttcagctccaaactattgtggggaa
tttgataatgcgggtgctctgttgagcatagatgaaagtttaatgtgttcttttcaaatc
ttgaagccaaatgatacgggggctccacattcaaggaaaccaacttcaaacaagacccca
aaaactggaaacgcttaa
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