Oryza glaberrima (African rice): 127753939
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Entry
127753939 CDS
T08853
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127753939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127753939
Membrane trafficking [BR:
ogl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127753939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
TopoV_HHH
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
127753939
NCBI-ProteinID:
XP_052135350
UniProt:
I1QZR8
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All DBs
Position
11:13243311..13250889
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AA seq
793 aa
AA seq
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MAADPSAAAAAAPDPDGPDAVRLTWNAWPRSKVEASRCVVPLAAAISPVRSPESLASPPL
PYPPLRCKPPCSALLNPFARVDFAAKIWICPLCFSRNHFPPHYAAISESNVPAELFPQCS
TVEYLLAGAAPAAGVPLHQGGPPAPPPPVFLFVIDTCVIEEELEYVKMSMRKAVALLPEH
ALVGLVTFGTQVHLHELGFSDLSKIYVFRGTKEISKEQILDQLGLAGAGRPGFPKMPQQP
GGPQINGMHPPATAGVTRFLLPVSDCECTLSTLLDELQPDQWPVETGNRAIRCTGVALSV
AAGLLGACMPGTGARIIALLGGPCTEGPGMIVSKDLSEPVRSHKDLDKDAAPHFQKAVKF
YDGLAKQLVSQGHVLDVFASALDQVGLAEMKVAIERTGGLVVLSESFGHSVFKDSFKRIF
EGGEQSLDLSFNGTLEINCSKDIKVQGIIGPCTSLEKKGALCADTVVGQGNTTAWKMCGL
DRNTSLTVFFDVSPSERSSQPGHQNPDLYIQFVTSYQHPEGQMRIRVTTICRKWVDGSTN
TEELVEGFDQETAAVVLARYISLKMEMEEEFDATRWLDRSLIRLCSRFGDYRKDDPSSFS
LHSNFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRESITNSVAMIQPSLISFSFD
SPPSPVFLDVASIAADRILLLDAYFSVVIFHGMTIAQWRNMGYQNQPEHQQFAQLLQAPH
EEAQIIIKGRFPAPRLVVCDQHGSQARFLLAKLNPSATYNSAHDVPPGSDIIFTDDVSFQ
VFCEHLQRLAVQS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgatccctccgcggccgcggcggccgccccggacccggacggccccgacgcc
gtacgcctcacctggaacgcctggccgcgctccaaggtggaggcgagccgctgcgtcgtg
ccgctcgccgccgcgatctccccggtccgctcgcccgagtcgctcgcctcgccgccgctc
ccttacccgccgctccgctgcaagcccccctgctcggccctcctcaaccccttcgcccgc
gtcgacttcgctgccaagatctggatctgcccgctctgcttctcccgcaaccacttcccg
ccccactacgccgccatctccgagtccaacgtccccgccgagctcttcccgcagtgctcc
accgtcgagtacctcctcgccggcgccgccccggccgccggcgtgcccctccaccagggc
ggcccgcccgcgccgccgcccccggtattcctcttcgtgatcgacacctgcgtcatcgag
gaggagctcgagtacgtcaagatgtccatgcggaaggccgtcgcgctcctgccggagcac
gcgctcgtcggcctcgtcacgttcgggactcaggtgcatctgcacgagctcgggttctcc
gatctcagcaagatctacgtcttccggggcaccaaggagatctccaaggagcagattttg
gatcagcttgggttggcgggtgcggggcgtccgggtttccccaagatgcctcagcagcca
ggggggcctcagatcaacgggatgcatcccccggcaacggccggggtgactaggttcttg
ctcccggtgtcagactgcgaatgcacgctcagcacgctgctggacgagttgcagcctgac
cagtggccggtggagactgggaaccgggcgatccggtgcacgggtgttgcgttgagtgtg
gcggctggcttgctcggggcttgtatgcctgggactggcgcaaggatcattgcgcttctt
ggtggtccatgcaccgagggtcctggaatgattgtgtcgaaagatttgtcagagccagtt
agatcacataaggatcttgataaggatgcagctcctcacttccagaaagctgtcaaattt
tacgatggccttgccaaacaattggtcagtcaaggccatgtcttagatgtttttgcatct
gctcttgatcaggttggccttgccgagatgaaggtcgctattgagagaacaggtggcctt
gttgtcttatctgaaagctttgggcattcagtatttaaggattcttttaaacgtattttt
gagggaggggaacagtctctcgacctttcattcaatggcacgcttgaaataaactgttcg
aaggacattaaggttcaaggtattattggaccatgcacatctttggaaaagaaaggagct
ctgtgtgccgacacagttgttggtcaaggaaatacaacagcatggaaaatgtgtggtctt
gacaggaatacttcattaacagtattttttgatgtctcaccgagtgagcggtcaagccaa
ccaggacatcagaatcccgatctgtatatacaatttgtaacaagttaccaacacccagaa
ggtcaaatgaggattagagttactaccatatgcagaaaatgggtggatggatctaccaac
acagaggaattagtcgagggttttgaccaggaaactgcagctgttgtgttggcgagatac
atctcgttgaaaatggaaatggaggaagagttcgatgcaacacggtggcttgatagatcc
ctcatacggctttgttcaagatttggggattatcggaaggatgatccatcttcatttagc
ttgcattcaaatttctctttgtttcctcagtttatgtttaatctacggcgttcacaattt
gttcaggttttcaataacagtccagatgagacagcttatttccggatgttactcaaccgt
gagagtatcactaactcggttgccatgattcaaccatcattaatttcattctcttttgat
tcgcctccatctcctgtattcctcgatgtggcatcaatagcagcagatcgtatactgcta
cttgatgcatacttcagtgttgtcatcttccatggtatgacaattgctcagtggagaaac
atgggttaccagaatcaacctgagcatcagcaatttgcacaattgttgcaagctcctcac
gaggaggctcaaataataattaaaggacgatttcctgctccaagactagttgtctgtgac
caacatggctcacaggcaaggttcttgttggcaaagctgaacccatcggctacatataac
tcagcacatgatgttcctccaggttctgacatcatattcactgatgatgttagtttccag
gtcttctgtgagcatcttcaaaggctggccgttcagtcctaa
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