KEGG   Oryza glaberrima (African rice): 127754022
Entry
127754022         CDS       T08853                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogl03041]
    127754022
Spliceosome [BR:ogl03041]
 Complex B
  Other components
   Complex B specific factors
    127754022
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd LisH_TPL Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_WDR19_1st DUF7165 WD40_RFWD3 VPS8_N Beta-prop_HPS5 Beta-prop_IP5PC_F zf_topless
Other DBs
NCBI-GeneID: 127754022
NCBI-ProteinID: XP_052135438
UniProt: I1NMN7
LinkDB
Position
1:complement(11316372..11322548)
AA seq 517 aa
MASSASTLEIEARDVVKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIDTFIADINAGR
WDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEQPERYL
RLEHLLVRTYFDPNEAYQESTKEKRRAQISQAIASEVSVVPPSRLMALIGQALKWQQHQG
LLPPGTQFDLFRGTAAMKQDEEETYPTTLSHQTKFGKKTHPECARFSPDGQYLVSCSVDG
IIEVWDYISGKLKKDLQYQADESFMMHDDAVLSVDFSRDSEMLASGSQDGKIKVWRIRTG
QCLRRLERAHAKGVTSVTFSRDGTQILSSSFDTTARVHGLKSGKMLKEFRGHNSYVNCAI
FSTDGSRVITASSDCTVKVWDTKTTDCLQTFKPPPPLRGGDATVNSVHLSPKNSDHIIVC
NKTSSIYIMTLQGQVVKSFSSGKREGGDFLAASVSPKGEWIYCVGEDMNMYCFSYQSGKL
EHLMKVHDKDVIGITHHPHRNLIATYAEDCTMKTWKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgtcgtcggcgtccaccctcgagatcgaggcccgcgacgtggtgaagatagtgctg
cagttctgcaaggagaactcgctgcagcagacgttccagacgctgcagaacgagtgccag
gtctcgctcaacaccgtcgacagcatcgacaccttcatcgccgacatcaatgccgggcgc
tgggacgctgtgctgccccaggttgcgcagctcaagctgccgcgcaagaagctcgaggac
ctgtacgagcagattgtgctcgagatggctgagctccgtgagctggacacggcgcgcgcc
atcctccgccagacccaggtcatgggcgtcatgaagcaggagcagcccgagcggtacctc
aggcttgagcatctccttgtccggacatactttgaccccaatgaggcctaccaagaatcc
accaaggagaaacgacgtgcacagatttcccaagctattgcttctgaagtttcagtagtt
ccaccttctcggctaatggcactgattggtcaggctttgaaatggcaacagcaccaagga
ttgttaccacctggcacacagtttgatttatttagaggaactgctgcaatgaagcaagat
gaagaggaaacatatcctactactttatcacatcaaacaaagttcgggaagaaaactcac
cctgaatgtgctcgattttcacctgatggccagtaccttgtatcatgctcagtggatgga
atcattgaggtttgggattatatcagcgggaagcttaaaaaggatcttcaatatcaagct
gacgaaagcttcatgatgcacgatgatgcggtgctttctgttgatttcagtagagattct
gagatgctggcatctggatcacaggatggaaagattaaggtttggcgtatacgaactggc
cagtgtttgcgtcgcctcgagcgtgcacatgcaaaaggtgttacaagtgttacattctca
cgtgatggaactcagatattgagttcatcctttgacactactgcaagagtacatggcctc
aagtccggaaagatgctgaaggaattccgaggccataactcatatgtgaattgtgccatc
ttttctacagatggtagccgtgttattacagcttccagtgattgtactgttaaggtgtgg
gatacgaaaacaacagattgtttgcaaacattcaagccaccacctcctttgaggggagga
gatgcaactgttaactctgtccatttatctccaaagaacagtgatcacattattgtgtgc
aataagacatcttcaatatacataatgactctacaaggacaggttgtaaaaagtttttca
tctggtaaacgggaagggggagatttccttgcagcttccgtttcaccaaaaggagaatgg
atatattgtgttggtgaagacatgaacatgtattgctttagctaccagtccggtaaactg
gagcatctaatgaaggtccacgacaaggatgtgataggcatcactcaccaccctcatagg
aacttgattgctacttatgctgaagattgcacgatgaaaacatggaagccttga

DBGET integrated database retrieval system