Oryza glaberrima (African rice): 127754392
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Entry
127754392 CDS
T08853
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
127754392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127754392
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127754392
Membrane trafficking [BR:
ogl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127754392
Atg1 complex
127754392
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127754392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
127754392
NCBI-ProteinID:
XP_052135859
UniProt:
I1QXY3
LinkDB
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Position
11:complement(2851637..2855920)
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AA seq
601 aa
AA seq
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MAAAAEPPMVEQVITEFFAKSLHIILESRSPYESSRNFTLPSPPSSPLSGSQPRDRWFNL
ALRDCPAALENFDLWRQSNLEPLVIDIVLLCRDSTSNTAAGSGKIIERWVIQYEARKSGG
GNGNGSKNNGRKSRNSSAEDHSLYRATYQGSTVLLRSLHLLVRLLPAYSLFRELNSSGRI
RPLNLSHKISSFVEPFTRAEDAEMKHYAFAPIETLFGRLSLSVSYVPVLEVVAASEPTSP
MPPEIITDYVGSPTTDFLKKFNSLPSAGIAPACAAMTRRHSWSIEHGAGTSASPSPSPTK
AQSRGSPQLGVPLHVSLKTCSHPQNASSSGQKKYTPFEECYPSPPLSPSPSQSPSANYPK
NPLFRYESAPVTIPTLKSGGGGGSGLPPSPCSKGKHQFSSHNDNLAHSPDHNSNVRKDLV
RLGEFEKDMALQKVLSYSKYDLGYFHGLKLTRTSSKLFIMDELDEHELVFAWEDRDTIID
QLNRADISDREEQKNQDAGGSSTRSPAAAIGALVHLLKTAPSLREGLQSDAAAVVPQEPS
SVQKVVTEEHGSIASSSTPVTATDALEELKKYREVKESILNRGKTQVSGTNLGEKLTDGE
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgcggagccacccatggtggagcaagtgatcaccgagtttttcgccaag
agcctccacatcatactggagtcgcgctctccgtacgagtcgtcgcgcaacttcacgctg
ccctcgccaccgtcctcgccgctgtccgggagccagccacgcgaccggtggttcaacctt
gcgctccgggactgcccggctgcgctcgagaactttgacctgtggcggcagagcaacctt
gagccgttggtcattgacattgtcctcttatgccgggacagcaccagcaacacagctgct
gggagtgggaagataatagagaggtgggtgatacagtatgaagctcgcaagtctggcggt
ggcaatggtaatggcagcaagaacaatggcaggaagtctaggaacagctcggctgaggat
catagcttgtacagggctacctaccagggatcgacagtgttactccggtcattgcatctg
ctcgtcaggctcttgccagcatacagtctcttcagggaactgaactcatctgggagaatc
cgtcctctcaacctgtcacacaagatatcttcatttgttgagccattcacccgggcagag
gatgcagagatgaaacactatgcatttgctccaattgaaactctgtttggccgattgagc
ttgtcagtttcttatgtgccagtgttggaggtggtggcagcttcagaacctacatcacca
atgccaccagagatcataacggattacgttgggagccccacaactgactttctaaagaaa
ttcaattccctcccttcagctggcattgcacctgcatgtgctgcaatgaccaggaggcac
agttggagtattgagcatggagctggaacgtcagcgtcgccatctccttctcccactaag
gcacaatcccgtggaagcccacagctaggcgttcctctgcatgtttctctaaaaacatgc
tcacatccacaaaatgcatcatcctctgggcagaagaaatatacaccatttgaagaatgc
tatccatcaccaccattgtcaccatcaccatcccaatccccttcagctaactaccctaaa
aaccctttgttccgatatgagagcgcaccagttactattcccacattgaagtcaggcgga
ggaggaggtagcgggttgcctccttctccatgttcgaagggtaagcaccagttctcatct
cacaatgacaacctggcacattcccctgatcataactcaaatgtaaggaaggatctagtc
aggttgggtgaatttgaaaaggacatggccttgcaaaaggtattatcttacagtaaatat
gatttgggatactttcatggactgaaattgactcggacatcaagtaaactttttattatg
gatgaactggatgaacatgaattggtttttgcatgggaagatagagacaccataattgat
cagcttaacagggctgatatctcagacagggaggaacagaagaaccaagatgctggtggc
tcgtccacaaggtctccagctgcagccattggtgctcttgtgcatctgctgaagactgca
ccaagcctcagagaaggcctacagtcagatgcagctgctgtggttcctcaagaaccttcg
tcagttcagaaggtcgtgactgaggaacatggcagcatcgcatcaagttctacaccggtg
acggcaactgacgcccttgaggagctgaagaaatacagggaggttaaagaatcgatactg
aatcgcggcaaaacacaggtcagcggcaccaatctaggagagaagctcacagatggagaa
ccttag
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