KEGG   Oryza glaberrima (African rice): 127754449
Entry
127754449         CDS       T08853                                 
Name
(RefSeq) transportin MOS14
  KO
K15436  transportin-3
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03013  Nucleocytoplasmic transport
ogl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127754449
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127754449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ogl03016]
    127754449
Transfer RNA biogenesis [BR:ogl03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    127754449
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th ARM_FBXO47 Importin_rep_3 UME
Other DBs
NCBI-GeneID: 127754449
NCBI-ProteinID: XP_052135947
LinkDB
Position
11:complement(18923869..18936406)
AA seq 1019 aa
MDAEASELRARLAAAVHALNHGGGHHHDPSARLAANQWLLALQRSPQAWGVATSLLAAPP
PGHPPPPADLLFFAAQMLRRKIQCPPAAAGGCPTPQEVAHLLDALLLAAGRFCLGPPRLL
TQISLALAALALRAEGGVDGLFARMRHLPDPAVMELLTVLPEEVVQDQSGDTGVDAAARC
RFTRELMAHAPAVLEFLLAQSENNAAAADGVPLHERNRRILRCLLSWVRVGCFSEMPAAA
LAAHPLLTFAFNSLQVSFSFDVAVEVMTELVSHHQDLPQAFLSKMPYIREALLLPALANR
SEKTIAGLVCLMSEVGQAAPALVAEGSVQALALADALLRCVAFSSDDWEIADSTLQFWCS
LAHFILDSDAQTEKRNAAQEIFSPVFSSLLDALLFRAQIDTDEHGTDGELCIPDGLAQFR
MNLEELLVDICLLLGAPAYINKLFSGGWGLASQSIPWKEVEVRMYALSMVADTILQDGSP
FDFSIIMHFVNILSSRAHSELNGCLSLVYKSFGDVIGSYSKLLASSQSNIKPLLLFCASG
ILKSISSNACSLALRKLCEDGSSFMNEPQNLEILFWISEGMDAGNLRIEDEEEIISAITH
ALCSVLDKELRKSSLARLLCSSYTAVEKLIDIDRDQSLRQNPAAYTEALNLAVHGLYRMG
ALFGHLATSITSSLIDDDTVLVLLGIFWPLLERLSRSSHMENVSLSAAACRSLSSAIHSC
GQHFQILLPKVLECLSTNFLLFQRHDCFLRTAASVIEEFGHKEEYVALCVRTFEALSSAA
SISTLNSSYTCDQEPDLVEAYANFTSTFIRCCPKEAIVASGSLLELSFQKAAICSTAMHR
GAALAAMSYMSCFLDVSLAAALESREHPSDGSPGVVLAQILARCGEGLMSNVLYALLGVS
ALSRVHKSATILQQLAAVCSLCERTTWKAIISWDSLCRWLQSAVKSMPSEYLRQGEAEMI
VPLWLNVLHDAASDYLHSRTGDNVRNNHAYMQGKGGRTLKRIVRDFAESHRNAPMPCPS
NT seq 3060 nt   +upstreamnt  +downstreamnt
atggacgcggaggcgtcggagctgcgggcgaggctcgccgccgcggtgcacgcgctcaac
cacggcggcggccaccaccacgacccgtcggcgcggctcgcggccaaccagtggctcctc
gcgcttcagcggtcgccgcaggcgtggggggtggccacctcgctgctggccgcgccgccc
ccgggccacccgcccccgcccgccgacctgctcttcttcgccgcgcagatgctccggagg
aagatccagtgcccccccgccgccgccggtggttgccccacgccgcaggaggttgcccac
ctcctcgacgcgctcctcctcgcggcggggcggttctgcctcggcccgccgcggctgctc
acgcagatctccctggcgctcgcggcgctggcgctccgcgccgagggcggggtggacggc
ctcttcgcgcggatgcggcacctccccgaccccgccgtgatggagctgctcactgtgctc
cccgaggaggtcgtgcaggaccagagcggggacaccggggtggacgccgcggcgcgctgc
aggttcacccgcgagctcatggcgcacgcgcccgccgtgctcgagttcctcctagcccaa
tccgagaacaacgccgccgccgccgacggggtccccctccacgagcgcaaccgcagaatc
ctgcgctgcctactgagctgggtccgcgtgggatgcttctcggagatgccggcggcggcg
ctcgcggctcacccacttctcaccttcgcgttcaactcgctgcaggtgtccttctcgttt
gatgtggccgtagaggttatgaccgagcttgtcagtcatcaccaagatctacctcaggca
tttctaagtaaaatgccatatattagagaagctcttcttctaccagctcttgccaacaga
agcgagaagactattgctggtcttgtttgtttgatgtctgaagttggtcaggcagcacct
gctttggttgcagaagggagtgttcaagcacttgctcttgccgatgcacttttgagatgt
gtagccttttctagtgatgattgggagattgcagattcaaccttgcaattttggtgcagt
ttagcacattttatacttgatagtgatgcacaaacagaaaaaaggaatgctgcacaagag
atattttcccctgtgttttcttcactgcttgatgcacttctttttcgtgctcagattgac
actgatgaacatggcactgatggggaattatgcatacctgatggactagcacagttcaga
atgaacttggaggagcttcttgttgatatttgcttgcttctaggtgctcctgcgtatatt
aataagcttttttctggtggatggggtttggctagccaatcaattccttggaaagaggta
gaagttcgaatgtatgcacttagcatggtcgctgacacaattttacaagatggaagcccc
ttcgatttttcaatcataatgcattttgtgaacattctgtcgagcagagcacacagcgaa
cttaatggatgcctatccttggtatacaaatcatttggtgatgtcattggttcttactca
aagttgttggcatcctctcaaagtaatattaaaccattactcctgttctgtgcttcaggg
attttaaaatccatatcatcaaatgcttgctcattagctttgcgtaaactttgtgaggat
ggttcttcattcatgaacgagcctcagaatctggaaattcttttctggatcagtgagggc
atggatgcggggaatctgcgaatagaggatgaggaagagatcattagtgcaattacacat
gctttatgttctgttcttgacaaagagttaaggaaaagttcactagcaaggttactttgt
tccagctacacagcagtggagaagcttattgacatagacagagatcaatctctgcgtcaa
aatccagcggcttacacagaagcattgaaccttgctgtccatggtctctacaggatgggt
gctttatttggccatttggcgacatcaattacatctagtctgattgatgatgacacggtt
ttggttcttcttggtatattctggccacttcttgaaagactttcccgatcatctcatatg
gagaatgttagtttatctgcagctgcatgtcgttctctttcttcagccatacattcttgt
ggacaacacttccagattttgttacctaaagttctggaatgcttatcaacaaatttctta
ctgtttcaaaggcatgactgcttcttaagaacagctgccagtgttattgaagaatttggt
cacaaggaagaatatgttgctttatgtgtcagaactttcgaagcacttagctctgcagct
tcaatatctactttgaattcttcttacacatgtgatcaagaacctgatcttgttgaagcc
tatgcaaactttacatccacatttattcgctgctgcccaaaggaagctattgtcgcatct
ggctccctgcttgagttgtcatttcaaaaggcagctatatgctctacagcaatgcaccga
ggagcagcacttgctgcgatgtcatatatgtcatgttttcttgatgttagcctcgctgct
gcactagaatctcgagagcacccctctgatggatcacctggtgtggtgctagctcaaatt
ttggcacgctgcggtgaaggtctcatgtcaaatgtactttatgctctacttggtgtatcg
gccttgtcaagggtgcataaatctgcaacaatattgcagcagttggcagcagtgtgcagc
ctctgtgagagaacaacgtggaaggccattatttcttgggattccctttgtcgatggctg
caatcagcggtgaaatctatgccctcagagtacctaaggcaaggggaagctgagatgata
gttcctttatggctcaacgtacttcatgatgcagcctcagactatcttcacagtaggact
ggtgataatgtcagaaacaaccatgcttacatgcaagggaaaggcggaagaacccttaag
cgtatagtcagggactttgcagaaagccatcggaatgcccccatgccctgcccttcgtaa

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