Oryza glaberrima (African rice): 127754522
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Entry
127754522 CDS
T08853
Name
(RefSeq) transcription factor JAMYB
KO
K09422
transcription factor MYB, plant
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127754522
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
127754522
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
127754522
NCBI-ProteinID:
XP_052136051
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Position
11:complement(25496616..25499776)
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AA seq
285 aa
AA seq
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MEMVLQRSHHPVPGQEQQEAAAELSSAELRRGPWTVDEDLTLINYISDHGEGRWNVLARA
AGLKRTGKSCRLRWLNYLRPDVKRGNFTAEEQLLILDLHSRWGNRWSKIAQHLPGRTDNE
IKNYWRTRVQKHAKQLNCDVNSKRFKDAMKYLWMPRLAERIHARAGADDDSRDYSNNDLS
CVSGVTMATVANCFDGSPSMVTSSSSDSFTSESQDLKKINLHVHGDDEKMNSEDWMQEVD
HEFWSTEIQPNNEQFQDQQLNGWVQGFSEGLSETLWSLEDIWKMQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtgctgcagaggagccaccacccggtgcccgggcaggagcagcaggaggcg
gcggcggagctgtcgtcggctgagctccggcgagggccatggaccgtcgacgaggacctc
accctcatcaattacatctctgatcacggcgagggccgctggaacgtactcgcgcgtgcc
gccggtctgaagaggactgggaagagctgccggctccggtggctgaactatctccggccg
gatgtgaagcgcggcaacttcaccgcagaggagcagctgctcatcctcgacctccactcc
cgatggggcaaccgatggtccaagatagcacaacatttgcctgggaggaccgacaacgag
atcaagaactactggaggaccagagtgcaaaagcatgccaagcaactcaattgtgatgtc
aacagcaagaggttcaaggatgctatgaagtacctgtggatgcctcgccttgccgagcgc
atccatgccagggctggtgctgatgatgatagcagagactacagcaacaacgacttatca
tgtgtatctggtgtaacaatggccactgttgctaattgttttgatggctctccgagcatg
gtgactagctcatcttccgattcgttcacgtcggagtcacaagatttgaagaagattaac
ttacatgtgcatggtgatgatgagaagatgaactctgaagactggatgcaggaggtggac
catgagttttggtctacagagattcagcctaataatgaacagtttcaggaccaacagctc
aacggttgggtgcaaggcttttctgagggtttgtccgaaactctatggagtctagaggac
atatggaagatgcaataa
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