Oryza glaberrima (African rice): 127754593
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Entry
127754593 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127754593
KO
K17925
sorting nexin-13
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogl04990
]
127754593
Domain-containing proteins not elsewhere classified [BR:
ogl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127754593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
127754593
NCBI-ProteinID:
XP_052136127
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All DBs
Position
11:complement(2694624..2702803)
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AA seq
1037 aa
AA seq
DB search
MRRAMVGVDDLIEEAKVRTVWWALCVFAISYFLTHTSKSMWTNVPMSILILAFLRYLSFK
VEFHWRGQPVQKQTHLSQLSKRQLSAHDHRLSTVAPVSRWRRKVGSPSVEAAFESFIENI
LRDFVVDLWYSSITPDREAPELIRGLILHALGEISGRVKEMNLVDLLTRDMADLIGHHLD
IFRKNQSQIGVDVMGTLSSEERDERLKQHLIVSQELHPALLSSEHEYKVFQDIVGGIMAL
VLRPQDAQSPLVRCFSRELLTCLVLQPVMNFASPIYMNELIIYLMNNKDTNSGGGNLDNS
NSSVTVTNAHSAHKGSSQGCQVESRNLSQESSGLVPANSSGMRSLVTHDGDKSKMSKIEH
GSAIQSRQPDWAVGLDAATKRRSQVLAPENLENMWAIGRNYQKKMVKFEHSRGKSSGIDN
IPSAGAAGKELSPNFNERITSVDDKYMVNLMQGSNRNAQSTYVTGSHPLVSQEWQDTDEA
KPNEGSQVDCSSTEKPCETINNTKAQLKRSNSTPDIEKRYLAKSNQTMVSSEIARKNQGD
RGSFPVSHGEVVLYVPKIRCRVVGAYFEKLSSKSFAVYSIAVTDAENKAWFVKRRYRNFE
RLHRQLKEIPNYSLHLPPKSFLSSSIDDYLVHQRCILLDKYLQELLSIPNIAEQHEVWDF
LSATSKNYSAGKSTSVMKTLAVNVDDAMDDIVRQFKGVSDGLKRAVGTSPTSAPSSHLAE
NQMSLSWNQEEIDNLNLHNRNLSGAHSLSDGDSNYEDPSSSVNSASHSDNELNNSRYGSN
DIKLNEAYSGFDAQASQQIEKPTRAYSDSSNMSSLNTFEDPAGIPPEWTPTNVSVHLLNL
VDKVFQLKRRGWIRKQVLWISKQILQLVMEDAIDEWILRQINWLRRDEVIVQGIRWIQDT
LWPNGVFFTRLDGYQGNAGPSQFDKHPSGSANQASGNRKDSASSFEQQLEASRNASEVKK
LLLGGTPPTLVSIIGYKQYQRSARDIYYFLQSNVCVKQLAYAMIEQVLVSLFPELRQLIE
DIHEKGRKEQASFTYQL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcggagggcgatggtgggcgtggacgatctgatcgaggaggcgaaggtgcgcaccgtg
tggtgggcgctctgcgtcttcgccatctcctacttcctcacgcatacgagtaaatcaatg
tggacaaatgtgcccatgtcaattcttatacttgcgtttctccgatacctttcattcaaa
gtggaattccattggagaggccagcctgttcagaagcagacacatttgtctcaattgtca
aaacgacagttgtctgctcatgatcatcggctttcaactgtggcaccggtttcaagatgg
agaaggaaagttggttcaccttctgttgaggctgcttttgaaagtttcattgagaatatt
ttgagagactttgtggtggacttgtggtattcatctattactcctgatagagaggcccca
gagttgatacgtggtctaatacttcatgctcttggagaaatatcaggcagggtgaaggaa
atgaatctagttgacttgctaacaagggatatggctgatttgataggacaccatttagat
attttccggaaaaatcaatctcaaattggtgttgatgttatgggaacattgtcatctgag
gaaagagatgagagactgaagcagcacctaatagtttcacaggaactccatcccgcattg
ttatcttcagagcatgaatataaggtttttcaagatattgttgggggtataatggctcta
gttttaagaccgcaagatgctcagagtccattggttcgctgtttctccagggaactgctg
acctgcttagtcctgcagccagtgatgaactttgcaagtcctatctacatgaatgagcta
attatttaccttatgaacaacaaagatacaaacagtggaggagggaatttagacaactct
aattcttcagttacagtaacaaatgcccattcagctcataaaggaagttcacagggttgt
caagtggaatcaaggaatttgtctcaagaatccagtggcttagtaccagcaaatagttct
gggatgaggtcacttgttactcatgatggtgacaagtcaaaaatgtcaaagattgaacat
ggtagcgccatccagtctcgacagccagattgggctgtgggactggatgcagctactaaa
aggcgatctcaggttcttgctcctgagaatcttgagaacatgtgggcaattggaagaaat
taccaaaagaaaatggtgaaattcgagcattcaaggggaaaaagttcaggcatagataac
attccaagtgcgggagcagcaggaaaagagttatctcctaatttcaatgagagaattaca
tctgttgatgacaaatacatggtcaatttgatgcaaggttcaaataggaatgcccaatct
acctatgtcacaggtagtcacccacttgtttcgcaagaatggcaagatacggatgaagca
aaaccaaatgaagggagtcaagttgattgcagcagcacagaaaaaccctgtgaaactatc
aacaacacaaaagctcagttaaagaggtctaatagtactcctgatattgaaaaaagatat
ctagccaaaagtaatcaaaccatggtttccagtgaaatagcaagaaaaaatcagggtgat
agaggttcttttcctgtctcacatggtgaagtagtattgtatgttccaaagataaggtgc
cgggttgttggtgcatattttgagaaacttagttcaaaatcctttgccgtttattctatt
gcggtgactgatgcagagaacaaggcttggtttgtgaaaagaagataccgaaactttgaa
cgtcttcatcgacaactgaaggagattcctaattactctttgcacttgcctccaaagagt
tttctttcatctagtattgatgattaccttgtgcaccagcgatgcattttgctggacaaa
tatcttcaagaactcttgtccatacctaatatagcagagcagcatgaagtttgggatttt
ctgagtgcaacctcaaagaattactctgctggaaagtctacttctgttatgaaaaccttg
gctgttaatgttgatgatgcaatggatgatattgttcgacagtttaaaggagtttcagat
ggtctgaaaagggctgttggaacctcacctaccagtgcaccttcttcacatttggcagag
aatcagatgtctctatcttggaatcaggaagagatagataaccttaatctgcataataga
aacctgtcaggtgctcatagtctttctgatggtgatagcaattatgaagatccctcctca
tctgtaaatagtgctagccactcagacaatgagttgaacaacagtcggtatggttcaaat
gatatcaagctcaatgaagcatattctggttttgatgcacaagcaagccaacaaatagag
aaacctactagggcatattctgattcttcaaacatgtcttctctaaatacatttgaagat
ccagcaggaattcctcctgagtggactccaacaaatgttagtgttcatttgttgaatctg
gttgacaaggtgttccaactaaagcggcgtggttggataagaaaacaagtactctggata
tcaaagcagattttacagttagtcatggaagatgcaattgatgaatggattttaagacag
atcaattggctccgaagagatgaagttattgtacaaggaatacgctggattcaagatact
ctctggcccaatggtgttttcttcaccaggttggatggatatcaaggaaatgcaggtcca
agccaatttgataagcacccatctgggagtgctaatcaggctagtggcaacagaaaggat
agtgcaagctcttttgaacaacaactggaggcatctagaaatgctagtgaagttaagaaa
cttcttctaggtggaactccgccgacattagtcagcataatagggtacaagcagtaccag
cgtagtgcgagggacatttactacttcctccaatccaatgtctgtgtgaagcagcttgct
tatgcaatgatagagcaggtgcttgtgtcgctcttcccagagcttcgtcagctaatagag
gacatacatgagaaaggtcgtaaggagcaagcgtcattcacttaccaactttga
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