Oryza glaberrima (African rice): 127754599
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Entry
127754599 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127754599
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127754599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127754599
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
127754599
Prokaryotic type
Archaeal type
TFE
127754599
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Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rrf2
Zn_ribbon_IS1595
DUF7815
Sgf11
Zn_ribbon_SprT
A24_N_bact
Motif
Other DBs
NCBI-GeneID:
127754599
NCBI-ProteinID:
XP_052136132
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All DBs
Position
11:1628488..1635081
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AA seq
496 aa
AA seq
DB search
MASMEPLNQMVRMVARAFYYDVSLARDPKSARGDNCGLAVVVLDALGRERRQWVREEDLA
KALKISSKQLRRILQFFEEEKLVRRCHRKESPKGVNISNNVSGTTGDVHPFTKGGEKAKM
HTHSYCCLDYAQFFYMHVYDVVRYRIHRMRKKLKDELDDRDTVQHYVCPNCKRRYSAFDA
LQLVSVMDDYFHCEHCKGELLPESEKLTLDEIVCGGDNAIKHKHDKLKDMQQRMEEQLKP
LIAVLDRVKDLPFPSFMSLQDWERATMEASANGAVGSSQNSEGRYSSKPMPFLGETEVEV
NFLGSTGAQEGVESGMESIKPQPSWMNRKSTVLTGEHKGEISNTADLDQSSEAKSDKKQL
SEEDEMKSIQETYAKVYYEAIRKRQEDEDKRMIQEERLTCISDQPFASDAQFERRLGAKS
KRDDGGDSGDDGIEMKVEQPTGNIGEVYKLADLDVETQESIDDDDDDDLVWDSRTDGSKF
DTSSPIEWEVQNVWKV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatggagcccttgaaccagatggtgaggatggtggcgcgcgcattctactac
gacgtctcgctggccagagaccccaaatccgctcgcggcgacaactgtgggcttgccgtc
gttgtcctcgatgccctcggcagagaacggcgccagtgggtccgagaggaagatttggct
aaagcattaaagatttcctctaagcaactacgccgcattctccagttttttgaagaagag
aagctagtgagaagatgtcatcggaaggagtcaccaaaaggagtaaacatatctaacaat
gtctctggcaccactggtgatgtgcatccttttactaaaggaggagagaaagcaaagatg
cacacacattcctactgttgtttggactatgctcagtttttctacatgcatgtatatgat
gttgtaagatataggatacaccgcatgaggaaaaaattgaaagatgagttagatgacaga
gatacagttcaacattatgtatgtcctaactgtaaaagaaggtattcagcatttgatgca
ctgcaacttgtaagcgttatggatgactattttcactgtgagcattgcaaaggagaactt
cttccagaaagtgaaaagcttactttggatgaaattgtgtgtggtggtgacaatgcaata
aagcataagcacgataaactaaaggatatgcagcaaagaatggaggagcaattgaaacca
ttaatagcagtacttgacagggtaaaggatcttccttttccatcttttatgagtttgcaa
gattgggaaagagcaactatggaggcatctgcaaatggtgcagttggttcatctcagaat
tcagaagggcggtacagcagtaaaccaatgcccttccttggggaaacagaggttgaagtt
aatttcttaggaagtactggtgcacaggaaggtgttgaatctggaatggaaagtataaag
ccacagccctcatggatgaatcgtaagagtacagtcctcacaggggaacataaaggagaa
atcagtaacactgcagatctggatcaaagttcagaagccaagagtgacaagaaacagctc
tcagaggaagatgagatgaagagcatacaggagacatacgcaaaagtttattatgaggct
atccggaaaaggcaggaagatgaggacaaaaggatgatacaagaagaaagacttacatgt
atttctgaccagccatttgcttctgatgcacagtttgagaggcggttgggtgccaaatca
aaacgtgatgatggtggtgactctggtgatgatggcattgaaatgaaagtggagcaacca
acagggaatataggagaggtatataagttggctgatctggatgtggagacccaagaatca
attgatgatgatgatgatgatgatcttgtttgggacagtaggactgatggctccaagttt
gatacatcatcaccaattgagtgggaagtgcaaaatgtgtggaaggtttag
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