Oryza glaberrima (African rice): 127754653
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Entry
127754653 CDS
T08853
Name
(RefSeq) la-related protein 6B-like
KO
K15191
La-related protein 7
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127754653
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
127754653
SSDB
Ortholog
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GFIT
Motif
Pfam:
La
RRM_1
PAM2
U_exon
DUF5320
Motif
Other DBs
NCBI-GeneID:
127754653
NCBI-ProteinID:
XP_052136181
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All DBs
Position
11:complement(7581712..7590240)
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AA seq
483 aa
AA seq
DB search
MSQQEVADPAQAAEEEGPGELPRSGSSSRLNAQAPEFVPRAAAAPPQAAVAAPPPPPQVI
RVFAAAPPPPPASFFAAVPPPPPPPFEYYPAVGGGGGFGAPVELEAEAEQQPPPGQQSGR
DGISDDVVHKITKQVEYYFSDINLATTEHLMRFITKDPEGYVPISVVAGFKKIKALIQSN
AMLASALRTSSKLVVSNDGTRVKREQPFTESDLEELQARIVVAENLPDDHCYQNLMKLFS
TVGSVKTIRTCYPQTPNGTGPVTNRSAKLDMLFANKLHAFVEYDTVEDAEKAIVELNDER
NWRNGLRVRLLNTCMTKGGKGKKGGHDINDGHGVEDDVSTSNQSNEKHGEEALQTPDAQG
EQLPDESAGDMGRGRGKGRGRGGRGRGRGYHYHNNNQQSYHNHQQHNHQNSNNRNTAHPV
GTPPSNHPAKNEQQQQAQPQPPAGANKQPPGPRMPDGTRGFAMGRGMPQTLTTTPSASSG
SEP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaggaggtggcggatccggcgcaggcggcggaggaggaggggccgggggag
ctgccgcggagcggctcctccagcaggctcaacgcgcaggcgccggagttcgtgccgcgc
gccgcggcggcaccgcctcaggcggcggtggcagcgccgccgccgccgccgcaggtgatc
cgggtgttcgccgcggcgccgccccctccccccgcgtcgttcttcgccgcggtgccccct
ccgcccccgccgccgttcgagtactaccccgcggtcggtgggggtggcgggttcggtgcg
ccggtggagctcgaggcggaggccgagcagcagccgccgccggggcagcagtcggggagg
gacgggatctccgacgacgtggtgcacaagatcacgaagcaggtggagtactatttcagt
gatataaatctagccaccacggaacatttgatgagattcattaccaaggatccagaagga
tatgttccgatatcagttgttgctggctttaagaagattaaggctttgatacaaagtaat
gcaatgcttgcttcagctcttcggacatcatcaaaactcgttgttagtaatgatggaaca
agagtaaaacgtgagcaaccgtttacagagtcagatttagaagagctccaggcccgaatc
gttgttgcagaaaatcttccagatgatcattgttaccagaatctcatgaagcttttttca
actgttggcagtgtcaagacaattcgaacatgctatcctcaaaccccaaatggcactggt
ccagttactaatagatctgccaagctagatatgctttttgctaacaagctgcatgctttt
gttgagtacgatactgtagaggatgctgagaaagcgatcgtggaacttaatgatgagagg
aactggagaaatgggctgagagttcgattattgaatacttgcatgacaaagggaggcaaa
gggaaaaagggtggccatgatatcaatgatggacatggtgtagaggatgatgtctccact
tctaaccaatcaaatgagaaacatggagaagaagcactgcaaacaccagatgcacaggga
gaacaattgcctgatgagagcgcgggggatatgggacgagggcgtggcaaaggccgtggc
cgtggaggtagaggccgagggcgtggctaccactaccacaacaacaatcaacagagctac
cacaaccatcagcagcataatcatcagaacagcaacaaccggaacaccgcccatccagtc
ggaacgccgccatccaaccatcctgccaagaacgagcagcaacagcaggcacagccacag
ccaccagcaggagcaaacaagcagcctccagggccacgcatgcctgacggaacacgcggg
ttcgccatgggcagagggatgccgcaaacattgacgacaacacccagcgcatcatccggt
agcgaaccttga
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