Oryza glaberrima (African rice): 127754809
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Entry
127754809 CDS
T08853
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127754809
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127754809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
127754809
NCBI-ProteinID:
XP_052136364
UniProt:
I1QXE4
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Position
11:complement(1508911..1513215)
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AA seq
465 aa
AA seq
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MGRKIKVKKKKASSKKAEASSSRVPSAPAKVWQPGVDTLEEGEELQFDPQAYNYLRGFNI
GWPCLSFDVVRDQLGLVRSEFPHTLYGVAGTQAERATWNYIGIFKICNINGKKREPIPAS
TIDGDSDMDSESSSDEEDEAVNEDTMPILHLKKVAHAGCVNRIRSMNQEPHICATWGDTG
HVQVWDFSSFLNSLAESGAVAHNEDDRIHNHVPVKIFGGHKDEGYAIDWSPLVTGRLVSG
DCNKCIHLWEPTSNSWNVDTNPFVGHTASVEDLQWSPTEADIFASCSADRTISIWDIRTG
KKPCISVRAHNADVNVISWNRLASCMIASGCDDGSFSIRDLRLIKDDSLVAHFEYHKHPI
TSVEWSPHEPSTLAVSSADHQLTIWDLSLEKDAEEEAEFRARMREQADAPEDLPPQLLFV
HQGQKDLKELHWHPQIPSMIISTAADGFNMLMPSNIDTTIREADA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaagatcaaagtcaagaagaagaaggcatcgagcaagaaagccgaagcttca
tcgtctagggtgccttctgccccagccaaggtatggcaacctggcgtggatacactggaa
gagggggaggagctccagttcgatcctcaggcttacaattatctccgagggtttaacatt
ggctggccatgcttgagttttgatgttgtgcgggatcaacttggccttgtgcgatctgaa
ttcccacatacattatatggcgtcgctggaactcaggccgagagggctacatggaattat
atcggcattttcaagatttgcaacataaacgggaagaagcgggaacctataccagcatca
acaattgatggcgacagtgatatggatagtgaaagtagtagtgatgaagaagatgaagca
gttaatgaagatacaatgcccattttacatctaaaaaaggtggctcatgcggggtgtgta
aatcgtattcgctctatgaatcaggaaccacatatatgtgcaacatggggagacacaggt
catgttcaggtgtgggacttcagctccttccttaattcgttagcagagtctggagcagtt
gcacacaacgaagacgacagaatccataatcacgtacctgtgaaaatatttggtggccat
aaagatgaaggctatgcaattgattggagtccgcttgttactggaagacttgtttctggt
gattgcaataaatgcatccacctctgggagccaacttcaaacagttggaatgtcgataca
aatccatttgtaggacacactgcaagtgttgaagatttgcagtggagtcccacagaagcc
gacatatttgcctcttgttcagccgacagaacaatatctatctgggatatacggacaggg
aagaaaccttgtatttctgttagggctcacaatgctgacgtgaatgtcatctcatggaac
cggcttgctagctgtatgatagcttcaggatgcgatgatggaagtttctcaattcgtgat
cttagattaatcaaggatgactccttggtcgcccattttgaataccacaagcacccaatt
acatctgtggaatggagcccacatgaaccgtcaacactagctgtatcatcagctgaccat
caactgacaatttgggatctttcattggaaaaagatgctgaagaggaggcagagttcagg
gcaaggatgagagaacaggctgatgcccctgaagatttacccccacaacttctctttgtt
catcagggccagaaggacttgaaagaattgcactggcacccacagatacctagtatgatc
atatctacggcagctgatggattcaatatgttgatgcccagcaacatcgatacaaccatt
cgagaagctgacgcatag
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