Oryza glaberrima (African rice): 127754812
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Entry
127754812 CDS
T08853
Name
(RefSeq) prolycopene isomerase 1, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00906
Carotenoid biosynthesis
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Module
ogl_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
127754812
Enzymes [BR:
ogl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
127754812
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
GDI
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
127754812
NCBI-ProteinID:
XP_052136369
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Position
11:20231830..20236182
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AA seq
641 aa
AA seq
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MWGPPLRLIRRALVFPPLTSTTSRGGILSLQIPPRPLLPYKNPTQLELPRFTGAAMPLLL
LAAARPCARLLAPSAAGAVVGRPSTARPLGRGTRRGAGAAAAAAVAAEKTVVKAEEEEEG
GGEYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSSGYYRRDGFTFDVGSSVMF
GFSDKGNLNLITQALEAVGHKMEVIPDPSTVHFHLPGDLSVLVHREYDDFVTELVNKFPH
EKEGILKFYGTCWKIFNSLNSLELKSLEEPLYLFGQFFQKPLECLTLAYYLPQNAGDIAR
KFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGINYPVGGVGGIAMSLAD
GLVDKGSEIRYKANVTNVILENGKAVGVRLSNGKEFFAKTVISNATRWDTFGKLLKVEEL
PEEEKNFQKNYVKAPSFLSIHMGVKASVLPADTDCHHFVLEDDWANLEKPYGSIFLSIPT
VLDPSLAPEGHHILHIFTTAGIEDWEDLSRKDYEKKKEFVATEIIKRLEKKLFPGLQDSI
VLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFNTTSIDGLYCVGDSCFPGQGVI
AVAFSGIMCAHRVAADIGLEQRSPVLDAGLLGLLRWLRTLA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtggggccccccacttcgcctcatccgccgcgccctcgtcttccctccactaacctcc
accacctcccgcggcggaatcctctcgctgcagattccaccgcggcctctcctcccatat
aaaaaccccacccagctcgagctcccgcgcttcaccggcgccgccatgccgctcctcctc
ctcgccgccgcgcgcccgtgcgcccggctcctcgctccctccgccgccggagcagtagta
ggccggccgtccaccgcccgcccactgggacgagggaccaggagaggcgcgggcgcggcg
gcggcggctgcggtggcggcggagaagacggtggtgaaggcggaggaggaggaggagggt
gggggagagtacgacgcgatcgtggtggggtcggggatcggggggatggtggcggcgacg
cagctggcggcgaagggggcgagggtgctggtgctggagaagtacgtcatccccgggggg
agctccgggtactaccgccgcgacgggttcaccttcgacgtcggctcctccgtcatgttc
ggcttctccgacaaggggaacttgaatttgattacacaagcactagaagcagttgggcat
aagatggaagttataccggatccttctacggttcatttccacctacctggtgacctctca
gttcttgtgcatagagagtatgatgacttcgtcacggagctggttaataaatttcctcat
gaaaaggaaggaatcctgaaattctatggcacatgttggaagatcttcaattcattaaat
tctttggagctgaagtcccttgaggagcctctatatctttttgggcaattttttcaaaag
cctctggaatgtttgacgctagcttattatctgccacagaatgctggggatattgctcgc
aagttcataaaagatcagcagttactctccttcatagatgctgagtgctttattgtgagc
acagtcaatgccttgcaaacacccatgattaatgcaagcatggtcttgtgcgataggcac
ttcgggggaattaactatccagttggtggtgttggtggtattgctatgtccttggcagat
gggcttgttgacaaaggcagtgaaatacgctacaaggctaatgtgaccaatgtaatttta
gaaaatggcaaagctgttggagtcaggttatcaaatgggaaggagttctttgctaaaaca
gtgatatcgaatgctaccagatgggatacatttggtaaactcttgaaagttgaagagctt
ccagaagaagagaaaaacttccaaaagaattatgttaaagcaccatcattcctttccatt
catatgggtgtcaaagcctcagttttgcctgctgatactgattgccaccattttgtactt
gaggatgactgggctaatttggagaagccttatggaagcatatttttaagtatccctaca
gtgcttgacccatccttggctcccgaaggacaccatatacttcatatttttacaactgca
gggatagaggattgggaagatctgtccaggaaggattatgagaagaaaaaggagtttgtg
gcgacagagataataaagaggcttgaaaaaaagctgttccctggtcttcaggattcaata
gtcctcaaggaggtaggctcaccaaaaacacaccgaagatttcttgcacgaaatgatggt
acatatggacccatgccacggggtaaaccaaagggattgctagcaatgcctttcaatact
acttcaatagatggcttgtactgtgttggcgacagctgttttcctgggcaaggtgtaatt
gctgtggcattttcagggatcatgtgtgctcatcgagttgcagctgatattggactggaa
caaagatctcctgtactagatgcgggtcttcttgggctcctcagatggttgagaacgctt
gcttag
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