Oryza glaberrima (African rice): 127754967
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Entry
127754967 CDS
T08853
Name
(RefSeq) probable transcription factor RL9
KO
K28174
GARP family transcription factor, KAN subfamily
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127754967
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
127754967
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
127754967
NCBI-ProteinID:
XP_052136537
UniProt:
I1QX10
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Position
11:complement(308682..311097)
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AA seq
321 aa
AA seq
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MGSAGKEEEEEDGGGGAPAAAANNYGSSTTSSTTEEEGSGESRRRTSSSSSVRPYVRSKN
PRLRWTPELHLSFVRAVDRLGGQDRATPKLVLQLMNVRGLSIGHVKSHLQMYRSKKIDES
GQVIGGDSWRSDDHLPMQGGGHGGQAYNLGHLSLPALHHRSITAGSGTIFQSRFGNSWSP
WRCHGSYWLPAGHHLLVGSKPYYPPAAEAEAPFRRSSARYVARANTSNHPDFVQGSSSSP
DDNIMNHQRPVLKEMICSEGSNHQEGPLNLDLSLDICPRGEKRKRECSWRKQEEDHDHAT
VAIGADEEAESCATGLSLSLF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcaggcaaggaggaggaggaggaggacggcggcggcggtgcaccggcggcg
gcggccaacaactacgggagctcgacgacgagcagtactacggaggaggagggatccggg
gagagcaggcggcgcacgtcgtcgtcgtcgtcggtgcgcccctacgtccgctccaagaac
cctcgcctccgctggacgccggagctccacctctccttcgtccgcgccgtcgacaggctc
ggcggccaagatcgcgcaactcctaagctcgttcttcagctgatgaatgttagagggctt
agcataggccatgtcaagagccatctccagatgtataggagcaagaagatcgatgagtcc
ggccaggtgataggtggtgactcatggagatcagatgatcatctgccaatgcaaggtggt
ggtcatgggggacaagcgtacaaccttggccatctttccctgcctgctctccatcatcgc
tctatcactgctggctccggtaccatcttccagtccaggtttggcaattcatggtcccca
tggagatgtcatggatcatactggctccctgcaggccatcacctgcttgttggatcaaaa
ccctattacccaccagcagctgaagctgaagctcctttccgcagatcaagtgctaggtat
gtagctagagctaataccagcaaccatccagattttgtccaaggctcttcttcatctcca
gatgataatatcatgaaccatcaaagaccagttctgaaagagatgatctgcagtgagggt
agtaaccatcaagaaggccctcttaatctggatctctcactcgatatctgtccgcggggc
gagaagaggaagagagaatgcagctggaggaaacaagaggaagatcatgatcatgctact
gttgctattggtgctgatgaagaagcagagagttgtgctactgggctctctctttctttg
ttctga
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