Oryza glaberrima (African rice): 127755102
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Entry
127755102 CDS
T08853
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127755102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127755102
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127755102
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127755102
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
127755102
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
127755102
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
127755102
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
127755102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POPLD
POP1_N
Motif
Other DBs
NCBI-GeneID:
127755102
NCBI-ProteinID:
XP_052136702
UniProt:
I1R225
LinkDB
All DBs
Position
11:complement(24991301..24996393)
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AA seq
856 aa
AA seq
DB search
MAGVPPPPRQLDVRRFAAARAGELRSLHESVSARLAGRFTQPRSARRRTTGHLPSNKRRR
LRSRDAEAADGTEEEEGRPSRRVRRRRELAGNPAEGFSAAGDGARRLRTHLWHAKRFSME
RRWGFVLPIGAHGRGRGSRTVLKWLKNGTVVHDASYFTPVELDGPEDSLLSIVRMVLHPS
PQDKTPGLKHLHGQVMRGVCYENAMLCRVGCPHLEIVGPVTYMWRPFLREGGELETEDVD
LSNSQIISDERNSLRRQLWIWIHPSALSEGLETLRAACHQQMQESGDTISCCSLEGKMAR
LEVMGSNAMQSLKSILKPVSNPSISTKLVNKNNVTTSTDPLYCSTGSHLLKRSVFDNADI
LQSGAILSMIVHDPRDNSVEGTDSSKTVSLDQNNQLMEEYQVPNADETPSGIGNILSSIW
LNPGNHDLALSDCRELWDSSLKINPPVDEKILCMEKHHRRMKFFCLDSGNDQGQTSQEKD
SIGRSCPVILLKHAKGSLLSVGWSVILPLSWVKPFWFYLVSHGAHAIGLRERRWIASKLK
MPCFPYDYPDSKAYSLFMAEEAAVLDKATNCRPSSMRPPRVPVPPLWHCVIANFRKGDGI
LSNLEDDLKSVATVLSESIPVNSNSGDAESSPTSAPTSFQLLVPRTIQVLRQYVKKIDEK
YLNSSDMEAVTGKSSLVSGDNVKTGCSINRLCLVRVLIRAFKEGSFEEGAVVCAPLPSDL
SAWNRKTRSEEEEEECLEKWELQLPQSHVSSYFSWLDPSTSNLQLPNGDSTRKAFRWPIG
FVTTGFVHGSSGQDAVAVAFCEAKLLAVLRRQQWRTHESLKRKDICVLVRNARSAAYRRA
LATIVLEQQEDDLKFL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgttcccccgccgccgcggcagctcgacgtgcggcgcttcgcggcggctcga
gccggcgagctccgttccctccacgaatccgtatccgcccgcctcgccggccgcttcacg
cagccccgctccgcgcgccgccgcaccacgggccacctcccctccaacaagcgccgccgc
ctccgaagccgggatgccgaggcggccgacggtacggaggaggaggagggaaggccctcg
aggagggtgaggcggcggcgggagctcgcgggcaaccccgcggaggggttctccgccgcc
ggcgacggcgcgcggcggctgcgcacgcacctgtggcacgccaagaggttctccatggag
aggcggtggggattcgtcttgcccatcggtgcccatgggagaggaaggggttcaagaact
gttctgaagtggctcaaaaatggaacagttgttcatgatgctagctacttcactccagtt
gagctagatggtccagaggactccctgttatccattgtcagaatggttctgcatccatct
cctcaagataaaactcctggcttgaagcatctgcatggtcaagttatgcgaggtgtttgc
tatgagaatgctatgctttgccgtgttgggtgtcctcacctcgaaattgttgggccggtg
acatacatgtggcgtccatttttaagggagggtggtgaattggagactgaagatgtagat
ttgtccaattctcaaattatatctgatgaaagaaattctttacggcgccaattatggata
tggatccacccttctgctctcagtgaagggcttgaaacattaagagccgcttgtcatcaa
cagatgcaagaatctggtgacacaatcagttgttgctcactggaggggaaaatggcaaga
ttagaagtcatgggaagcaatgctatgcaatctcttaagagtatattgaagccagttagc
aatccaagtatatccaccaagctagttaataaaaataatgtgactacatcaactgatcct
ctgtattgctctactggctctcatcttttgaaaagatctgtttttgataatgctgacatt
cttcagtctggtgctatactatccatgatagtccatgaccccagagataattcagtcgag
ggaacagattcttctaaaacagtttccctggaccagaataaccaactcatggaggaatac
caagttccaaatgctgatgagacaccatcagggattgggaatattttgtcatcgatatgg
ctgaacccaggaaatcacgatttggccctttcagactgtagagaattgtgggattccagc
cttaagataaatcctcctgtggatgagaaaattctttgtatggagaaacaccacagacgt
atgaagtttttctgccttgattctggaaatgatcaaggacaaacaagtcaagagaaggat
tccattggtcgatcctgtcctgttattcttctgaaacatgcaaaaggcagtctgctctct
gtagggtggtctgttattctacctttgagttgggtaaaacctttctggttttatcttgta
tctcatggtgcacatgctattggcttaagagagagacggtggatagcctcaaagctcaag
atgccatgcttcccttatgattatccagacagcaaagcctattcattatttatggctgaa
gaggctgctgttctcgataaagctaccaactgccgcccttcttccatgagacctccaagg
gttcctgtaccacctttatggcattgtgtcattgctaattttcgtaaaggagatggcata
ctgagcaatcttgaagatgacttaaagagcgtcgctacagtattatctgaaagtatcccg
gtaaattccaactctggtgatgcagaatcatcaccaacaagtgctcctacatccttccaa
ctacttgtgccaagaaccattcaagtgttgagacagtatgtgaaaaaaattgatgagaag
tatttgaattcatctgacatggaagcagttactggcaagtccagtctagtttctggtgat
aatgtgaaaacaggatgctctataaacagattatgtcttgtaagggtgctgattagagca
tttaaggaaggttcttttgaagagggtgctgttgtttgtgccccactcccatcagacctt
tcagcctggaaccggaagaccagatcagaagaggaggaagaagaatgtctagaaaaatgg
gaactccagctccctcaatcccatgtaagttcttatttctcttggctggatcctagcacc
agcaatctccagctgccaaacggcgattctacacgaaaggcattcagatggccgataggc
ttcgtcacgacgggttttgtccatggaagtagtgggcaagatgctgttgcagttgccttc
tgcgaagcaaagcttctcgcggtgttgaggcggcagcaatggaggacacatgaaagtctg
aagcgcaaagacatctgtgtccttgtaaggaatgcaagatcagcggcataccgacgagca
ctcgcaacaattgtcctggagcagcaagaggatgaccttaagtttctctag
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