Oryza glaberrima (African rice): 127755104
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Entry
127755104 CDS
T08853
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127755104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127755104
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127755104
mRNA degradation factors
5'-3' decay
Decapping complex
127755104
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
127755104
NCBI-ProteinID:
XP_052136705
UniProt:
I1QXT8
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All DBs
Position
11:2419880..2423222
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AA seq
380 aa
AA seq
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MPPPPPPQPQPTTTATTSANGGKVTPNLTMDAEGTRLLNLTVLQRLDPAVEDILITAAHV
TLYDFNIDLNQWSRKDVEGSLFVVKRNTQPRFQFIVMNRRNTDNLVEDLLSDFEYELQPP
YLLYRNAAQEVNGIWFYNQHDCEAVASLFGRILNAYAKVPPKPKVPSTKSEFEELEAVPT
SAAIDGPLEPSPATTTIVSDAPDESLVNYFSSAASIGSVSNAPMAGRAHPSSESVATPHV
PLIIPSATPTHQIPPPLVGSSAPPLPLHDTNVHTARSANLVTPAFFTPPSSSSTSMVPPA
SSMMPTAPPLHPTSASAQRATYGTPLLQPFPPPTPPPSLTPSYNEGPIISRDKVKEALLR
LVQNDQFIDLVYRELQNAHM
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgccgccgccgccgcagccgcagccgacgacgacggcgacgacgtcggcgaac
ggggggaaggtgaccccgaacctgacgatggacgccgagggcacgcggctgctcaacctc
accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc
accctctacgacttcaacatcgacctcaaccagtggagtcggaaagatgtggaggggtcg
ctgttcgttgtgaagaggaatactcagccgaggttccagttcatcgttatgaacaggcgt
aacacggataatctggtggaggatctattgagtgattttgaatatgaacttcaacctccg
tatttgttgtaccgcaatgctgcccaagaagtaaatggtatctggttctacaatcaacat
gactgcgaagctgttgcaagtctttttggaagaatactgaacgcatatgccaaagtgcct
ccaaaaccaaaagtgccttccacgaaaagtgagttcgaggaattggaggctgtgcctaca
tctgcagccatagatggtccccttgaaccttcgccagcgaccaccactatagtttctgat
gctcctgacgaatccctggttaattacttcagtagtgctgctagcattggcagtgtctca
aatgctccaatggctggaagggcgcatccatcctctgagagtgttgcaactccccatgtg
cccttgatcattccatctgctactccgacacatcaaataccccctcctttagtcggctca
tcagctccgccactgcccctccatgatactaatgtccacactgcccgttcagcaaatctt
gtaacaccagcattttttacgcctccgtcatcctcttctacatcaatggtgcctccagct
tcatccatgatgccaacagcaccacctcttcacccaacttctgcatctgctcaacgagca
acatatggaacccccctactccaaccttttccaccaccaactccacctccatctcttacc
ccttcatacaatgaggggcctattatttcacgggataaagttaaggaagccctcctgaga
cttgttcagaatgaccagttcatcgatttagtctatcgggagttgcagaatgcacatatg
tag
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