Oryza glaberrima (African rice): 127755140
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Entry
127755140 CDS
T08853
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.13
KO
K14487
auxin responsive GH3 gene family
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127755140
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
127755140
NCBI-ProteinID:
XP_052136743
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Position
11:complement(18100294..18106475)
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AA seq
667 aa
AA seq
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MDHLTMTSTSSENAPDHDHDHDASSPAPATATAAALPPMIPACDPHDGPACLELIEVLTT
RAAAVQRRVLAEVLAMNAGTDYLRRFLGDEVAAAAGGEDELAAAFKERVPVVEYEDVKPY
IERIANGAPSSLISSKPITELLTSSGTSGGQPKLMPATEEELDRKTFLYNLLVPVMNKYV
EGLDEGRGMYLLFVKPEITTASGMVARPVLTSYYKSRHFRRRPDSPYTRYTSPDAAILCP
DSRQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGHWRALCADIRAGRTDPAVVT
DAACRGAVDAVLAARADPDLADAIAAECGGASWRGIVRRLWPRTKYIDVIVTGSMAQYIP
LLEFYGGGLPLVSTMYASSESYFGINLRPLDPPEEVVYTLLPNMCYYEFIKVEKDGDGEK
VRDGEVVDLVGVEVGAYYELVVTTFTGLYRYRVGDILQVAGFHNAAPQFRFVHRRNVVLS
VDTDKTSEDDLLRAVTAAKPLLDPLSCVLAEYTAYADTSSIPGHYVLFWELTPSPSPPPP
PCHDDADDAADIGEDKDKVAHVMAACCAAVEAGLDSVYRRCRSRDRSIGPLEIRAVAPGA
FDALMDMCVSHGSSVNQYKTPRCIKHPDAIAVLEQRVVGRFFSDAVPHWEPLKVDGAAAA
PATGGDQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctaacaatgacgtccacgtcgtctgaaaatgcgcccgaccacgaccacgac
cacgacgcctcttcgccggcgccggcgacggcgacggcggcggcgctgccaccgatgatc
ccggcgtgcgacccgcacgacgggccggcgtgcctggagctcatcgaggtgctgaccacg
cgcgccgccgccgtccagcggcgcgtcctcgccgaggtcctcgccatgaacgccggcacc
gactacctccgccggtttctcggcgacgaggtcgccgccgccgccggcggcgaggacgag
ctcgccgcggcgttcaaggagcgcgtgccggtggtggagtacgaggacgtgaagccgtac
atcgagcgcatcgccaacggcgccccgtcgtcgctcatctcctccaagcccatcaccgag
ctcctcacgagctccggcacgtcgggcgggcagccgaagctgatgccggcgacggaggag
gagctcgaccgcaagaccttcctctacaacctcctcgtccccgtcatgaacaagtacgtg
gaggggctggacgaggggagggggatgtacctgctgttcgtgaagccggagatcacgacg
gcgtcggggatggtggcgaggccggtgctgacgagctactacaagagccgccacttccgg
cggcggccggacagcccgtacacgcggtacacgagccccgacgcggcgatcctctgcccg
gacagccgccagagcatgtacgcgcagctgctctgcggcctcgcccgccgcggcgaggtg
ctccgcgtcggcgccgtcttcgcctccgccttcctccgcgccgtcaagttcctcgaggga
cactggcgcgccctctgcgccgacatccgcgccggccgcaccgacccggccgtcgtcacc
gacgccgcctgccgcggcgccgtcgacgccgtcctcgccgcccgcgccgaccccgacctc
gccgacgccatcgccgccgagtgtggcggcgcgtcgtggcggggcatcgtgcggcggctg
tggccgcggaccaagtacatcgacgtgatcgtgacggggtccatggcgcagtacatcccg
ctgctggagttctacggcggcgggctgccgctggtgtcgacgatgtacgcgtcgtcggag
tcctacttcggcatcaacctccggccgctggacccgccggaggaggtggtgtacacgctg
ctgcccaacatgtgctactacgagttcatcaaggtggagaaggacggcgacggcgagaag
gtccgcgacggcgaggtggtggacctcgtcggcgtcgaggtcggcgcctactacgagctc
gtcgtcaccaccttcacagggttgtaccggtacagggtgggggacatcctgcaggtggcc
gggtttcacaacgcggcgccgcagttccggttcgtgcaccggcgcaacgtcgtcctcagc
gtcgacaccgacaagacctccgaggacgacctcctccgcgccgtcaccgctgcgaagccc
ctcctcgaccccctctcctgcgtcctcgcggagtacaccgcctacgccgacacctcctcc
atccccggccactacgtcctcttctgggagctcaccccctctccctcgccaccgccgccg
ccatgccatgacgacgccgacgacgcagccgacatcggcgaggacaaggacaaggtggca
cacgtcatggcggcgtgctgcgccgccgtggaggccgggctggactcggtgtaccggcgg
tgcaggagccgggacaggtcgatcgggccgctggagatccgtgccgtggcgccgggggcg
ttcgacgcgctcatggacatgtgcgtgtcgcacggctcgtcggtgaaccagtacaagacg
ccgcggtgcatcaagcaccccgacgccatcgccgtcctcgagcagcgcgtcgtcggccgc
ttcttcagcgacgccgtcccgcactgggagcccctcaaggtcgacggcgccgccgccgcc
cccgccaccggcggcgaccagtga
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