Oryza glaberrima (African rice): 127755357
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Entry
127755357 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127755357
KO
K12586
exosome complex component RRP43
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127755357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127755357
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127755357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127755357
NCBI-ProteinID:
XP_052136972
UniProt:
I1QZK1
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Position
11:11488222..11495665
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AA seq
306 aa
AA seq
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MAAEAQATAAGGLAGEMEVEAYRRLFPLAFLERHLRESVRPDARRPAEARPTTVALAAVS
SAHGSALVRLGDTAMLASIKLEVMSPSGEAPDEGSIAVEFHMPPICSPLVRPGRPAEVAP
VISKNLEDILMRSGMLNLKELCLISGKASWLAYLDVYCLNADGSLFDAALISAVAAFTHL
EIPLVSVGDDGRVFTVGGNEGKAKYELVNREKRKLTITNVPFSLTCALHKDNVLADPTAE
EESIIETSVTIVLDSSDQIVSIQKPGGAVTSMTTIKECISLAKDRRRKLREILMDNVEAM
EVDQTD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcccaagccacggcggccggcggcctcgccggcgagatggaggtggag
gcgtaccgccgcctcttccccctcgccttcctcgagcgccacctccgcgaatccgtccgc
cccgacgcgcgccgccccgccgaggcccgcccaaccaccgtcgccctcgccgccgtgtcc
tccgcccacggctccgccctcgtccgcctcggcgacaccgccatgctcgcgtcgatcaag
ctcgaggtgatgtcgccctccggtgaggcccccgacgaaggatctattgctgtggagttc
cacatgccgcctatctgttccccgcttgtcagaccaggacggccggcagaggtggcgcca
gtcatctccaagaacctagaggacatcctcatgagatcagggatgctaaatttgaaggag
ctctgtttgatcagtgggaaggcatcttggttagcatacctggatgtctattgtttgaat
gctgatgggtctctattcgacgctgcactaatctcagctgttgctgcatttacacatttg
gaaattcctttggtatctgtcggtgatgatggtagagtatttactgttgggggcaatgaa
ggcaaagccaaatatgaattggtaaacagagaaaagaggaagcttacgattactaatgtt
ccattttcccttacatgtgcacttcacaaggataatgttctagcggatccaactgctgaa
gaagaatcaataatagagacttctgtgactattgttctcgattcttcagaccagatagtg
tcaatacaaaaacctggaggtgcagtgacatctatgacaactattaaggaatgcattagc
ttggctaaggacaggagaagaaagttaagagaaattctcatggacaatgttgaagcaatg
gaagtcgaccaaactgattaa
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