Oryza glaberrima (African rice): 127755474
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Entry
127755474 CDS
T08853
Name
(RefSeq) vacuolar protein sorting-associated protein 26A-like
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127755474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127755474
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
127755474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
127755474
NCBI-ProteinID:
XP_052137112
UniProt:
I1R1M0
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Position
11:22851219..22855559
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AA seq
304 aa
AA seq
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MNYIIGAFKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGEVSVAPVPGK
RVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYPFEFSTVEMPYESY
NGTNVRLRYILKVTIGRPYATSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEY
SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPGTYIETETLAKFELMDGAP
VRGESIPVRLFLTPYELTPTYRNINNKFNVKYYLNLVLVDEEDRRYFKQQEITMYRLQET
PQSS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatcatcggagcattcaaggcgccctgcgacgtcttcatcaccttcgccgat
gagaggagccggaagcaggtggcgatcaagaaggataacgggaagacgttgatggtgccg
gccttccagagcctggagactattgcaggagaggtgtcggtagcgcccgttccaggtaaa
agggtggagcaccaaggtgtcaagattgagctgctgggtcagatagagctgtaccatgag
agaggtcacttctatgacttcacttcgttagtgcgagagttagaggttgctggtgaaatc
tatgaaaggaagacttatccatttgaattctctactgttgagatgccttatgagtcgtat
aacggaacaaatgtcagattgaggtacatcctgaaagttacgattggcagaccatatgct
actagtgttgtggaatgtcgagatttctgtgtaaggaattacactcctcttccttcaatt
aacaatagcatcaagatggaagttggaattgaagattgtttgcatattgaatttgagtac
agcaaaagcaagtaccatctcaaggatgtgatcgtgggaaaaatctattttcttctagtc
agaataaagataaagaacatggagcttgagattcgtcggcgggaatcaacaggatctggg
cctggcacatatattgagactgagacacttgcaaagtttgagttgatggatggcgctccc
gtaagaggtgagtctattccagtaagactcttcttgacaccatatgagttgaccccgact
taccgcaacataaacaacaagttcaatgtcaagtactacctgaacctggttcttgttgac
gaggaagaccggaggtacttcaagcagcaagagatcacaatgtaccgccttcaagaaact
ccgcaatcttcataa
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