Oryza glaberrima (African rice): 127755595
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Entry
127755595 CDS
T08853
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00750
Vitamin B6 metabolism
ogl01100
Metabolic pathways
ogl01240
Biosynthesis of cofactors
Module
ogl_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
127755595
Enzymes [BR:
ogl01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
127755595
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
His_biosynth
NMO
Motif
Other DBs
NCBI-GeneID:
127755595
NCBI-ProteinID:
XP_052137241
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Position
11:26344397..26345549
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AA seq
312 aa
AA seq
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MASSDDGVVALYGGGKVSCKPPAATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA
VMALERVPADIRAQGGVARMSDPALIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYV
DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGTGNVVEAV
RHVRSVMGEIRALRNMDDDEVFSYAKRIVAPYDLVMQTKQLGRLPVVQFAAGGVATPADA
ALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEILADVSAGLGDAMVGINLN
DQNVERYAARSH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctgacgacggcgtcgtggccctctacggcggcggcaaggtctcctgcaag
ccccccgccgccaccttctccgtcaaggtgggccttgcccagatgctgcgcggcggcgtc
atcatggacgtggtcacccccgagcaggcacgcctcgccgaggaggccggcgcctgcgcg
gtcatggcgctggagcgcgtccccgccgacatccgcgcccagggcggcgtcgcgcgcatg
tccgacccggcgctcatccgcgacatcaagcgcgccgtcaccatcccggtcatggccaag
gcccgcataggccacttcgtggaggcccagatcctggaggccatcggcgtggactacgtg
gacgagagcgaggtgctcacccccgccgacgacgcccaccacatcaacaagcacaacttc
cgcgtccccttcgtctgcggctgccgcgacctcggcgaggccctccgccgcatccgcgag
ggcgccgccatgatccgcaccaagggcgaggccggcacgggcaacgtcgtcgaggccgtc
cgccacgtgcgctccgtgatgggcgaaatccgcgcgctccgcaacatggacgacgacgag
gtcttctcctacgccaagcgcatcgtcgcgccctacgacctggtcatgcagaccaagcag
ctgggccgcctccccgtcgtgcagttcgcggccggcggcgtcgccacccccgccgacgcc
gccctcatgatgcagctcggctgcgacggcgtcttcgtcggctcgggcatcttcaagagc
ggcgaccccgcgcgccgcgcccgcgccatcgtgcaggccgtcacccactacagcgatccg
gagatcctcgccgacgtcagcgctggcctcggggacgccatggtcggcatcaacctcaac
gaccaaaatgtcgagcgctacgccgcccgctcccactga
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