Oryza glaberrima (African rice): 127756206
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Entry
127756206 CDS
T08853
Name
(RefSeq) chloride channel protein CLC-a-like
KO
K05016
chloride channel 7
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127756206
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127756206
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogl04040
]
127756206
Protein phosphatases and associated proteins [BR:
ogl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127756206
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
127756206
Ion channels [BR:
ogl04040
]
Chloride channels
Chloride channel (CLC)
127756206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Zn_ribbon_PRDM4
Motif
Other DBs
NCBI-GeneID:
127756206
NCBI-ProteinID:
XP_052137561
LinkDB
All DBs
Position
12:complement(13131006..13134733)
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AA seq
785 aa
AA seq
DB search
MEEEQSPRLAAGEPERKLEDGVTDADAEDPGCTGNAAMSSLEQPLLKRSNTLTASHLAMV
GAKVSHIESLDYEIIENDLFKHDWRRRSNVEVLQYIFLKWAMAFLVGLLTGVIASLINLA
IENISGLKMLHMVQLVREKRYWAGFLYFAGVNFGLTFVAAMLCVVFAPTAAGPGIPEIKA
YLNGVDTPNMFGAPQLIVKIIGSICAVSSGLDLGKEGPLVHIGACLANLLSQGGSGRHRL
RWRWLRYFDNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFST
ATVVVVLRGFIEVCRNGRCGLFGEGGLILFDVGDVAVRYHAGDLLPVTIVGVLGGVLGAL
YNHVLHKVLRVYNLINEKGRAAKLALALAVCALTSALLYVTPFAVPCTPCDPAFGGACPT
LGKSGNFKRFNCPEGHYNDLATLLHATNVDATRNIFSTGTAGEFRLDSLLIFFAVYCVLG
LFTFGIAVPSGLFLPIILMGSAYGRVTALVLSRFARIDHGLYAVLGAAALMSGSMRMTVS
LVVIFLELTNNLLLLPITMFVLLIAKTVGDAFNPSIYEIILDLKGLPFLEAKPEPWMKDL
TVGELAAAKPRAVALQVVERVSTVVEALRATRHNGFPVLDRPRPGVSELHGLVLRSHLVA
ALRKRWFLPERRRTEEWEAREMFSSAELADKCGGVDELEISPEEMGMYVDLHPLTNTTPY
TVVETMSVAKAVVLFRSVALRHMLIMPKFQGPEISPIVGILTRQDLIAHNILGAFPHLAS
KRKTH
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagcagagcccgaggctcgccgccggcgagccggagcgcaagctcgaggac
ggagtcaccgacgccgacgccgaggaccccgggtgcacgggcaatgcggccatgagctcg
ctggagcagccgcttctgaagcggagcaacacgctgacggccagccacctcgccatggtt
ggcgccaaggtctcccacatcgagagcctcgactacgaaattatcgagaatgatctgttc
aagcacgactggaggaggcgatcgaacgtggaggtgctgcagtacatcttcctcaagtgg
gccatggcgttcctcgtcggcctcctcaccggcgtcatcgcgtcgctcatcaacctcgcc
atcgagaacatctccggcctcaagatgctccacatggtgcagctcgtccgcgagaaaaga
tactgggccggtttcttgtatttcgccggcgtcaacttcggcctgacgttcgtcgccgcc
atgctctgcgtcgtcttcgccccgaccgccgccggccccggcatcccggagatcaaggcc
tacctcaacggcgtcgacacgcccaatatgttcggcgcgccgcagctcattgtcaagatc
atcggtagcatctgcgcggtgtcgtcggggctggatctcgggaaggaagggccactggtg
cacatcggcgcgtgcctggcgaacttgctgagccagggcggctccggccggcaccgcctc
cggtggcggtggctgcgctacttcgacaacgaccgcgaccggcgcgacctgatcacctgc
ggcgcgtcgtcgggcgtgtgcgcggcgttccgggcgcccgtcggcggcgtgctgttcgcg
ctggaggaggtggcgacgtggtggcggagcgcgctgctgtggcgcaccttcttcagcacg
gccaccgtcgtcgtcgtcctccgcgggttcatcgaggtgtgcaggaacgggcggtgcggt
ctgttcggcgagggcgggctcatcctgttcgacgtcggcgacgtcgccgtccggtaccac
gccggcgacctcctcccggtgaccatcgtcggcgtgcttggcggcgtcctcggcgcgctg
tacaaccacgtcctccacaaggtgctccgcgtgtacaacctcatcaacgagaagggccgc
gccgcgaagctcgccctggcgctcgccgtgtgcgcgctcacgtcggcgctgctgtacgtg
acgccgttcgccgtgccgtgcacgccgtgcgacccggcgttcggcggcgcgtgcccgacg
ctggggaagagcggcaacttcaagcggttcaactgccccgagggccactacaacgacctc
gccaccctcctccacgccaccaacgtcgacgcgacgcggaacatcttctccacgggcacc
gccggcgagttcaggctcgactcgctgctcatcttcttcgccgtctactgcgtcctgggc
ctcttcaccttcggcatcgccgtcccctcggggctcttcctccccatcatcctcatgggc
tccgcctacggccgcgtcacggcgctcgtgctgtcgcggttcgcgcgcatcgaccacggc
ctatacgccgtgctcggcgcggcggcgctcatgtcggggtccatgcggatgaccgtgtcg
ctcgtcgtcatcttcctcgagctcaccaacaacctcctcctcctcccaatcaccatgttc
gtcctcctcatcgccaagaccgtcggcgacgcgttcaaccccagcatctacgagatcata
ctcgacctcaagggcctcccgttcctggaggcgaagccggagccgtggatgaaggacctc
accgtcggcgagctcgccgccgccaagccccgcgccgtggcgctccaggtggtggagcgc
gtgtccacggtggtggaggcgctccgggcgacgcggcacaacgggttcccggtgctggac
cggccgcggcccggggtgtcggagctgcacgggctggtgctccggtcgcacctcgtcgcc
gcgctgaggaagcggtggttcctgccggagaggaggaggacggaggagtgggaggcccgc
gagatgttcagctcggcggagctcgcggacaagtgcggcggcgtggacgagctggagatc
tcgccggaggagatggggatgtacgtggacctccacccgctgacgaacacgacgccgtac
accgtggtggagaccatgtcggtggcgaaggccgtcgtgctgttccgctccgtcgcgctc
cgccacatgctcatcatgcccaagttccaaggacccgagatatctccaattgtggggatc
ttgacaaggcaggacctgatagcacacaacatcctcggtgcatttccacaccttgcaagc
aagaggaaaacacattga
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