Oryza glaberrima (African rice): 127756605
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Entry
127756605 CDS
T08853
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03030
DNA replication
ogl03410
Base excision repair
ogl03420
Nucleotide excision repair
ogl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127756605
03410 Base excision repair
127756605
03420 Nucleotide excision repair
127756605
03430 Mismatch repair
127756605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogl03032
]
127756605
03036 Chromosome and associated proteins [BR:
ogl03036
]
127756605
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127756605
DNA replication proteins [BR:
ogl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127756605
DNA Replication Termination Factors
ELG1-RFC complex
127756605
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127756605
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127756605
Check point factors
HRAD17(Rad24)-RFC complex
127756605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
RuvB_N
Mg_chelatase
AAA_assoc_2
AAA_14
AAA_11
AAA_5
AAA_16
AAA_24
ResIII
SLFN-g3_helicase
AAA_2
nSTAND3
PhoH
DNAX_ATPase_lid
AAA_25
AAA_30
AAA_19
AAA_23
IstB_IS21
AAA_7
AAA_28
RNA_helicase
bpMoxR
Cdc6_lid
DUF3853
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
127756605
NCBI-ProteinID:
XP_052137916
LinkDB
All DBs
Position
12:3847141..3851214
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSN
RILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAIP
EDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARICK
KLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgtcctcgcagccatgggtggagaaataccggccgaggcaggtg
aaggatgtcgcgcaccaggaggaggtggtccgggtgctcaccaccaccctccagaccgcc
gaccttccgcacatgctgttctacggcccgcctggcaccgggaagaccaccaccgcgctt
gccattgcttaccagctctacggtccagagctctacaagtcaagagttctagaacttaat
gctagtgatgatcgtggaattaatgtggtgaggactaagatcaaggactttgctgctgtt
gctgttggttctgcacgaaaaggcggttatccctgcccaccatacaagattattatacta
gatgaagcagattcgatgacagaagatgcccagaatgctttaaggcgtactatggagact
tactccaaagtgacaagattctttttcatatgcaattacatcagcaggataatagaacca
cttgcatcaagatgtgcaaagtttagattcaagcctctttcagaagaagtaatgagcaat
cgcattttgcatatatgcaatgaagaagggctcagtcttgatgctcaggcattggctaca
ctaagcaccatctctaatggtgacctccgccgtgctataacctatcttcagagcgctgct
cgcttatttggatcttctatttcttctactgacttgattagtgtttcaggggctatccct
gaagacgttgtcaagtcattgcttgcatcttgcaaatctggtgaatttgatgtggcaaac
aaggaagtcaataatattattgcagatggataccccgtttcacagttgatctcacagttt
ctagatgtgatagttaatgccgatgatattccagatgagcagaaggcaagaatatgtaaa
aagcttggggaagcagataagtgcttggtcgatggagcggatgagtatttacagcttttg
gatgtggctagtgagactatccgcgctctttttgacatgccacaaacgctggtcttctaa
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