Oryza glaberrima (African rice): 127756620
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Entry
127756620 CDS
T08853
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00040
Pentose and glucuronate interconversions
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127756620
Enzymes [BR:
ogl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127756620
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Hexapep_loop
Motif
Other DBs
NCBI-GeneID:
127756620
NCBI-ProteinID:
XP_052137962
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Position
1:32904422..32905985
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AA seq
367 aa
AA seq
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MEPPQLDGQCGGEPPASVEGVVFMPYATADSSLRVMAGQAEGFGRHAIGGLHGDVYHVTT
LEDDGDGSLREGCRRREPLWIVFDVSGTIHLSTGLRVSSYKTIDGRGQRVTLSGKGLQLR
ECEHVIVCNLEVEGCRGHDADAVAVKPGSQHVWIDRCGLRGCGDGLLDVTRGSTDVTVSR
CRFSAHDKAVLIGGSAGHVEDRAIRVTIHHCLFDGTRQRHPRVRFGRVHLYNNYTRGWGI
YAVCASVESQIVSQCNIYEAGEKKKVFKYMIEQAADRDQSSTGFIRSEGDLFLNGAECTA
QDSEAAADELWDFKIQELDFYQSCSVQPASMALKELLECFTGWQPVPLPEDTCLEEETDS
APADTTA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcctcaactcgacggccagtgcgggggcgagccaccggcatccgtggaggga
gtcgtgttcatgccgtacgccaccgcggactcctcgctgcgcgtcatggccggtcaggcc
gagggcttcggccgccacgccatcggcggcctccacggcgacgtctaccacgtcacgacc
ctcgaggacgacggggacgggtcgctccgggagggttgccggaggcgcgagccgctatgg
atcgtcttcgacgtgtcgggcaccatccacctctcgacgggactgcgcgtgtcgtcgtac
aagaccatcgacggccgcgggcagcgtgtgacactgtccggcaaggggctccagctgcgg
gagtgcgagcacgtgatcgtctgcaacctggaggtggaagggtgccgcggccacgacgcc
gacgccgtggcggtgaagcccgggtcgcagcacgtgtggatcgaccggtgcggcctccgc
ggctgcggcgacggcctcctcgacgtcacccggggcagcacggacgtgaccgtgtccagg
tgccgcttctcggcgcacgacaaggccgtgctgatcggcggcagcgccggccacgtcgag
gaccgtgccatccgggtgaccatccaccactgcctcttcgacggcacgcggcagaggcac
ccgcgcgtccgcttcggcagggtgcacctctacaacaactacaccaggggctggggcatt
tacgctgtctgcgccagtgtcgagtcacagattgtatcccagtgcaacatttacgaggca
ggggagaagaagaaagtcttcaagtacatgatagaacaggcggcagacagagaccagagt
tcaactgggttcatccggtctgaaggcgacctgttcctgaacggtgcagagtgcactgct
caggattcagaagctgcggcagatgagctgtgggacttcaagattcaggaattggatttc
taccagtcttgttccgttcagccggcgtcaatggcgctcaaggagctactggagtgcttc
accggctggcagccagttccgctgccggaagacacttgcctcgaagaggaaactgattct
gctcctgctgacactactgcttga
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