Oryza glaberrima (African rice): 127756715
Help
Entry
127756715 CDS
T08853
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127756715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127756715
03036 Chromosome and associated proteins [BR:
ogl03036
]
127756715
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127756715
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127756715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
127756715
NCBI-ProteinID:
XP_052138047
LinkDB
All DBs
Position
12:3358101..3364381
Genome browser
AA seq
944 aa
AA seq
DB search
MFGSSNPFGQSSTSPFGQTSSNPFGAQTGFGQASTSTSNPFAPKPFGSPTTTFGAQTGGS
PFGTTSTGAFGQPSTPAFGSTSTGAFGQPSTPAFGATSAGAFGQPSTPAFGTPSSSPFGS
SAPAFGASPAPAFGATSSTFGSGSSLFGQKPSFGGFGSSPSQSNAFGGTFQQTQPAFGSS
TFGASSTPAFGATTTPAFGATTTPAFGTTTPAFGSTSPSLFGATSAPAFGSSGFGSSGTP
AFGASSTPGFGASSSASFGTSTSAFSFGSSPSFGQTASTFGSTPFGTSTSPFGAQTSPFG
SQTAAPTFGQTSFGNQAGGTRIQPYTQTPDADSATSGAQPTAKLDSISAMEAYKAKSHEE
LRWEDYQRGDKGGPNPSGTPAATPSFPSPLNNQFPQNPSNAFQTSNAFQTTSVSNPFAAK
PSTGFGSTSTTLFNSPFNNTSAASSSPFASTTSSPLFTQTSSSLFANSTPGFASSSPFGA
SLSNPSSFSTGLSLVNTQSAGLFSSSPAFAQQPFTQASSGFGLSTPAFSTGSLFSTPTPG
MTGGLFGSMSSPFSSTAFQQSAPTPSMFSFQPQTQTAPTGGFPGISNTMNQAPFGQPTPS
QSNMVMQPALVTNPFGTLPAMPQMSIGNGGSAPSVQYGISSLPVADKPLTNRTSLSMVVP
RHLSQRRIKVLPRKYNPISDGKVPFFADDEESPATPKADAFFIPRENPRNLIIRPIDQWP
SRGTVDRQPIPKNLVDTDKHKGPLAISPTRSTSIENGIQRDDRASNEPDTVTRHGNGTSV
ERLVPKLVHADYYTEPSLEELAAKERAEPGYCSRVRDFAVGRHDYGSIKFIGETDVRGLD
LESIVEFSNREVIVYKDDSKKPPVGEGLNKAAVVTLLNIKCMNKKTGDQYTEGPRVDKYK
EMLVKKAEEQGAEFISFDAVNGEWKFRVKHFSSYGFGEAEIVSC
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccagcaacccatttgggcagtcgtccactagccctttcggccagacctca
agcaacccttttggggcccagacaggatttggccaggccagcacctccacctccaatccg
ttcgcgccgaaaccatttggcagcccgaccaccacgtttggggcacagacaggaggctca
ccttttggcacgacgtccacgggggcctttggccagccgtccactccagcgtttggctcc
acgtccacaggtgcctttggccagccatccaccccggcgtttggcgcgacgtccgctggg
gccttcggccagccatccactccggcgtttggcactccatcatcctctccatttgggagc
tctgcgccagcttttggtgcatcaccagcccctgcatttggcgccacatcgtccaccttt
ggcagcggatcatcattgtttggacaaaagccaagctttggtggttttggttcctctcct
agccaatccaatgcttttggaggcacattccagcaaacacaaccagcatttggtagcagc
acttttggtgcatcaagcacgccggcctttggtgccacaactacaccagcatttggtgcc
acaactacaccagcatttggcaccaccaccccagcatttggttcaacatcgccatcatta
ttcggtgctaccagtgccccagcatttggttctagtggctttggatcttcaggtacccca
gccttcggtgcaagtagcactccaggatttggagcttcaagctcagcttcatttggcaca
tcaaccagtgcttttagctttggctcttcaccatcttttggtcaaacagcatctacattt
ggtagcactccttttggaacatctacatctccttttggtgcacagacttctccatttggt
tcacagacagcagcaccgacatttgggcaaacatcatttgggaaccaagcaggaggaacc
agaattcaaccctatactcaaactccagatgcggatagtgctacaagtggtgctcagccc
actgcaaagttggattctatatcagccatggaggcatacaaagcgaagagtcatgaagag
ttgaggtgggaggattaccaacgtggagacaaaggtggacctaatccttcaggaactcca
gcagcaacccctagcttcccatccccactgaacaatcaatttccccagaacccttcaaat
gcattccaaacttcaaatgcattccaaacgacatccgttagcaatccatttgctgccaag
ccttccactggtttcggttctacttccacaacattgttcaattcaccattcaataataca
tcagcagcaagctcaagtccatttgcatcaactacaagtagcccattatttacacaaaca
agcagttctctgtttgcaaattctactcctggttttgcttcttcttctccgtttggcgca
tcattatcaaaccccagttcattcagtactggcttgtccttggttaacactcaatcagct
gggctatttagttcttccccggcgtttgcgcaacagccatttacccaggcatcatcaggg
ttcggattgagcactccagctttctctactggaagcctattcagcacacctacccctgga
atgactggtggactgtttggcagcatgtcttcacccttttcatcaacggcgtttcaacaa
tctgcccctactccaagtatgttctccttccaacctcaaactcaaacagctcctactggt
ggatttcctggcatttccaacactatgaatcaggcaccttttggacagccaactcctagc
cagtccaatatggtcatgcaaccagctcttgttacaaatcccttcggtactctgccagca
atgcctcagatgtccattgggaatggtggatcagccccttctgttcaatatggaatctca
agtttgccagttgctgataagcctcttacgaacaggacatcattatccatggtggttcct
aggcatttgtcgcagagaaggataaaagtgctgcccagaaaatataatccgatatctgat
ggcaaggtcccattctttgctgatgacgaagaatctcctgcaacaccaaaagctgatgcg
tttttcattcctagagagaacccgaggaatcttataatccgtccaattgatcagtggcct
tcacgtggcactgttgacaggcagccaattccaaagaatttagttgatacagataaacat
aaaggccctctggctatttcaccaaccaggtctacttcaatcgaaaatggcatccagcgt
gatgaccgtgcatcaaatgagcctgatactgtgacaaggcatgggaatggtacttctgtt
gagaggcttgtgcctaagctagtgcatgccgattattatacagagcctagtctggaggag
cttgctgccaaagaacgtgctgaaccaggctactgcagtcgtgtgagggattttgctgtg
ggacgtcatgattacggtagcatcaagtttattggagaaacggacgtgaggggccttgat
ctggagtccattgtggaattcagtaaccgtgaagtgatcgtgtacaaggacgatagcaag
aagccccctgttggtgagggtctgaataaagctgccgtggtgacccttctcaatatcaag
tgcatgaacaagaagacgggggatcagtacacagagggtccgagggtggacaagtacaag
gagatgctggtgaagaaagctgaggagcagggtgctgagttcatctctttcgatgccgtc
aatggcgagtggaaattcagggtcaagcatttcagctcctatggctttggtgaagctgaa
atcgtctcttgctag
DBGET
integrated database retrieval system
