Oryza glaberrima (African rice): 127756857
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Entry
127756857 CDS
T08853
Name
(RefSeq) long chain base biosynthesis protein 2d
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00600
Sphingolipid metabolism
ogl01100
Metabolic pathways
ogl04382
Cornified envelope formation
Module
ogl_M00094
Ceramide biosynthesis
ogl_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
127756857
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127756857
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127756857
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
127756857
Amino acid related enzymes [BR:
ogl01007
]
Aminotransferase (transaminase)
Class II
127756857
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
SHMT
Motif
Other DBs
NCBI-GeneID:
127756857
NCBI-ProteinID:
XP_052138206
UniProt:
I1NUV2
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All DBs
Position
1:complement(37438461..37442328)
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AA seq
489 aa
AA seq
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MVRLPYVTALTTLFSYGLLFAFGQLRDFFRRILDAGKSSNLKGYAPICLGLEDFYTRRLY
LRIQDCFGRPIASAPDAWFDVVERYSNDSNKTLHRTTKTSKCLNLGSYNYLGFAAADEYC
TPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKPAAILFGMGYVTNSAIIPA
LVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEEVLREQIAGGQPRTHRPWK
KIIVIVEGIYSMEGELCKLPEVIAVCKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDPA
DVDIMMGTFTKSFGSCGGYIAASKEIIDHLKHICPAHIYATSMSPPAVQQVISAIKVILG
EDGSNRGAKKLAQIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
QHVAVVTVAFPATPLLLARARICISASHSREDLIKGLEVISKVGDLVGIKYFPVEHEKTA
SVEKLKKLQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctgccctacgtgaccgcgctgaccacgctcttcagctacggcctcctcttc
gccttcggccagctccgcgacttcttccgcaggatcctcgacgctggcaaatccagcaat
ctcaagggttacgcgccgatttgccttgggctggaggatttctacacgcgccgcctctat
ctccgcatccaggactgttttggccggccaattgctagcgcaccagatgcttggtttgac
gtggttgagcgttactcaaatgacagtaacaagacactgcatcgtaccacaaaaacatct
aagtgccttaacttaggttcctacaactaccttggctttgccgcggcagatgaatactgc
acccctcgtgttattgagtcactgaagaaatactctgctagtacttgcagtgtccgagtc
gatgggggcaacactaagctgcatgtggaacttgaagagctggttgcaagatttgttggc
aagcctgcagctattctttttggcatgggttatgtgacgaactctgcaatcattcctgcc
ttggttgggaagggaggactcataattagtgactcattgaaccataactctatagtgaat
ggggctaggggttcaggagctactgttcgggtttttcaacataacaatcctgcacacttg
gaagaggtattgagagagcagattgcaggaggccagcctcgtacacacaggccgtggaag
aagattattgtgattgttgagggaatatatagcatggagggggagctatgcaaactccct
gaggttatagctgtctgcaagaaatataaggcttacacatatttagacgaggcacacagt
attggagctgttggtaaaacagggagaggtgtttgtgagctactaggtgtggatccagct
gatgtcgatattatgatgggaacatttactaaatcatttggatcatgcggaggttacatt
gcagcatcaaaagagattattgatcatctgaagcacatatgccctgcccatatctatgca
acatccatgtcacctccagctgttcagcaggtcatttctgcaataaaagttatccttggt
gaagatggatctaacagaggggccaagaagcttgctcagattcgagagaacagcaatttc
ttccgttcagagcttcagaaaatgggttttgaagttcttggagacaatgactcgccggtc
atgcctatcatgctttacaatcctgctaaaatacctgcattctcaagagagtgcctgagg
caacacgttgctgttgttactgttgcatttcctgctacaccactactgcttgccagagct
aggatatgtatctcagcttcccactcaagggaagatcttattaaaggattggaggttatc
agcaaagttggtgacctcgtgggaatcaaatacttcccagtggaacatgaaaagactgca
tctgttgagaaactgaagaagcttcaatga
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