KEGG   Oryza glaberrima (African rice): 127757071
Entry
127757071         CDS       T08853                                 
Name
(RefSeq) cyclin-T1-4
  KO
K15188  cyclin T
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127757071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127757071
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     127757071
    Brd4/P-TEFb complex
     127757071
    7SK RNP complex
     127757071
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB Cyclin_C_2
Other DBs
NCBI-GeneID: 127757071
NCBI-ProteinID: XP_052138455
LinkDB
Position
12:16003792..16012293
AA seq 543 aa
MAMMPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKEIEENSPSRRDGIDLKKES
YLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVE
ETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHH
PYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL
PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRAAQAQPSHGNEAEGSSASVPNQRVSV
KSEETPLPHQSKQSSSQHSTGAPSHHGVEHSNLEKQTVDQKMLQNDNGDHGSNKTRSNQS
GSRVDFGANDGLHHDKQSMTENKNLPSHGNSSEIRDVNRNGNDGTNVTSLMVNKIDKDKV
KAQMEKQRKLKGDVARKVEVIDDDDDLERQLEHDIELAVEDNKIKQERKQSSPHVMHWGD
HRNADQVTGNGHLGKQNTPETAQDAPMDDIKEQRNSHGSKHHDSHDTAHERGERDYKRPR
PEG
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggctatgatgccaagtgattcatcacatcatggaattgtagaaaatagcccatacaga
actacccagggcaggaatgaggagactggtgaacttggtgcttcatggtatttcagtaga
aaggaaatagaagagaattctccatccaggagggatggcattgatttgaagaaagagtct
tacctccgaaaatcatattgtacttttctacaagatttgggcatgaggcttaaagtgcca
caagtcactattgctacagctattgtgttctgtcaccgtttttaccttcgtcagtcccat
gcaaaaaatgatagacgaacaattgccacagtttgcatgttcttggctggaaaagttgaa
gagacgcctaggcctttgaaagatgttattctggtttcttatgagattattcataaaaag
gatcctgctgctggtcagagaatcaagcagaaggaagtatatgatcaacaaaaagaactt
attttacttgcggagcgagttgtacttgcaactcttgggtttgatttgaatgtgcatcat
ccatacaagcctttggttgaagcaataagaaaatttaaagttgctcaaaatgcgcttgct
caggttgcatggaattttgtcaatgatgggctgcgtacttcgctttgcctgcagttcaag
cctcatcatattgcagcaggtgctatctttttggctgctaaatttctcaaagtgaagctt
ccatctgatggtgagaaggtttggtggcaggagtttgatgtgactccaagacagctggaa
gaagttagcaatcaaatgttggagctgtatgagcaaaaccgtgcagcacaggcacaaccg
tcccatggaaatgaagctgaagggagctctgctagtgttcctaatcagcgagtctctgta
aaatccgaggaaacacctcttcctcaccagtcgaaacagtcaagttcacagcattcaaca
ggtgctccaagtcatcatggtgtcgagcactcaaatctagaaaagcaaactgtggaccag
aaaatgcttcaaaatgacaatggtgaccatgggagcaacaaaacaagaagcaatcagagt
ggaagtagagttgattttggtgccaacgatggtttacatcatgacaaacagtccatgaca
gaaaataagaatcttccatcacatggcaactccagtgaaatcagagatgtcaaccgcaat
ggcaatgatggtacgaatgtgacatccttgatggtaaataaaattgacaaggataaggtg
aaagcacaaatggaaaagcaaaggaaactgaaaggtgatgttgctaggaaggtagaggta
atagatgatgatgatgatcttgagaggcaactagaacatgacattgaattggctgttgag
gataataagataaagcaggagaggaagcagagttcccctcatgttatgcattggggggat
catagaaatgctgatcaagttacaggcaatgggcaccttggcaagcagaatacaccagag
actgctcaagatgccccaatggacgacattaaagaacagcgcaattcccatggctcaaag
caccatgacagtcatgatactgctcatgagcgaggtgaaagagactataaaaggcctcgg
cctgaaggttag

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