Oryza glaberrima (African rice): 127757071
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Entry
127757071 CDS
T08853
Name
(RefSeq) cyclin-T1-4
KO
K15188
cyclin T
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127757071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127757071
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
127757071
Brd4/P-TEFb complex
127757071
7SK RNP complex
127757071
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Ortholog
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GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
Cyclin_C_2
Motif
Other DBs
NCBI-GeneID:
127757071
NCBI-ProteinID:
XP_052138455
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All DBs
Position
12:16003792..16012293
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AA seq
543 aa
AA seq
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MAMMPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKEIEENSPSRRDGIDLKKES
YLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVE
ETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHH
PYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL
PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRAAQAQPSHGNEAEGSSASVPNQRVSV
KSEETPLPHQSKQSSSQHSTGAPSHHGVEHSNLEKQTVDQKMLQNDNGDHGSNKTRSNQS
GSRVDFGANDGLHHDKQSMTENKNLPSHGNSSEIRDVNRNGNDGTNVTSLMVNKIDKDKV
KAQMEKQRKLKGDVARKVEVIDDDDDLERQLEHDIELAVEDNKIKQERKQSSPHVMHWGD
HRNADQVTGNGHLGKQNTPETAQDAPMDDIKEQRNSHGSKHHDSHDTAHERGERDYKRPR
PEG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatgccaagtgattcatcacatcatggaattgtagaaaatagcccatacaga
actacccagggcaggaatgaggagactggtgaacttggtgcttcatggtatttcagtaga
aaggaaatagaagagaattctccatccaggagggatggcattgatttgaagaaagagtct
tacctccgaaaatcatattgtacttttctacaagatttgggcatgaggcttaaagtgcca
caagtcactattgctacagctattgtgttctgtcaccgtttttaccttcgtcagtcccat
gcaaaaaatgatagacgaacaattgccacagtttgcatgttcttggctggaaaagttgaa
gagacgcctaggcctttgaaagatgttattctggtttcttatgagattattcataaaaag
gatcctgctgctggtcagagaatcaagcagaaggaagtatatgatcaacaaaaagaactt
attttacttgcggagcgagttgtacttgcaactcttgggtttgatttgaatgtgcatcat
ccatacaagcctttggttgaagcaataagaaaatttaaagttgctcaaaatgcgcttgct
caggttgcatggaattttgtcaatgatgggctgcgtacttcgctttgcctgcagttcaag
cctcatcatattgcagcaggtgctatctttttggctgctaaatttctcaaagtgaagctt
ccatctgatggtgagaaggtttggtggcaggagtttgatgtgactccaagacagctggaa
gaagttagcaatcaaatgttggagctgtatgagcaaaaccgtgcagcacaggcacaaccg
tcccatggaaatgaagctgaagggagctctgctagtgttcctaatcagcgagtctctgta
aaatccgaggaaacacctcttcctcaccagtcgaaacagtcaagttcacagcattcaaca
ggtgctccaagtcatcatggtgtcgagcactcaaatctagaaaagcaaactgtggaccag
aaaatgcttcaaaatgacaatggtgaccatgggagcaacaaaacaagaagcaatcagagt
ggaagtagagttgattttggtgccaacgatggtttacatcatgacaaacagtccatgaca
gaaaataagaatcttccatcacatggcaactccagtgaaatcagagatgtcaaccgcaat
ggcaatgatggtacgaatgtgacatccttgatggtaaataaaattgacaaggataaggtg
aaagcacaaatggaaaagcaaaggaaactgaaaggtgatgttgctaggaaggtagaggta
atagatgatgatgatgatcttgagaggcaactagaacatgacattgaattggctgttgag
gataataagataaagcaggagaggaagcagagttcccctcatgttatgcattggggggat
catagaaatgctgatcaagttacaggcaatgggcaccttggcaagcagaatacaccagag
actgctcaagatgccccaatggacgacattaaagaacagcgcaattcccatggctcaaag
caccatgacagtcatgatactgctcatgagcgaggtgaaagagactataaaaggcctcgg
cctgaaggttag
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