Oryza glaberrima (African rice): 127757183
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Entry
127757183 CDS
T08853
Name
(RefSeq) diaminopimelate epimerase, chloroplastic
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00300
Lysine biosynthesis
ogl00470
D-Amino acid metabolism
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
ogl01230
Biosynthesis of amino acids
Module
ogl_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
127757183
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
127757183
Enzymes [BR:
ogl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
127757183
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
127757183
NCBI-ProteinID:
XP_052138595
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Position
12:21047606..21052882
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AA seq
359 aa
AA seq
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MSSATAAATATIAAATAAAAAAKLAATPAPAPSRRRLTLRGNPTARRGVAAMAVSTPRSA
AAAAFLERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKLCDRNFGVGADGV
IFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFKIHTGAGLII
PEIQNDGKVKVDMGQPILSGPDIPTKLPSTKNEAVVQADLAVDGSTWQVTCVSMGNPHCV
TFGTKELKVLHVDDLKLSDIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATL
ACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDDNHIYMTGPAEAVFYGSAVH
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgccaccgccgccgccaccgccaccatcgccgccgccaccgccgccgccgcc
gccgcgaagctcgccgccacccccgcccccgccccctcccggcgccgcctcacgctccgc
gggaaccccaccgcgcgccgcggcgtcgccgcgatggccgtgtccacccccaggtcggcc
gccgccgccgcgttcctcgagcgccgcgagtcggagcgcgccctccacttcgtcaagtac
cagggcctcgggaacgacttcatcatggtggacaatagggattcggccgtgccgaaggtg
acgccggaggaggcggcgaagctgtgcgacaggaacttcggcgtcggtgccgacggtgtg
atcttcgtcatgccgggggtcaatggcgcggactacaccatgaggatcttcaactcggac
ggcagtgagccggagatgtgtggcaatggagtccgttgctttgcccggtttatagctgag
cttgaaaacctacagggaacacatagcttcaaaattcacactggcgctgggctaatcatt
cctgaaatacaaaatgatggcaaggtaaaggttgatatgggccagcccattctctctgga
ccagatattccaacaaaactgccatccaccaagaatgaagccgttgtccaagctgatttg
gcagttgatggctcaacatggcaagtaacctgtgttagcatgggcaatccacattgtgtc
acatttggcacaaaggagctcaaggttttgcatgttgatgatttaaagcttagtgatatt
gggcctaaatttgagcatcatgaaatgtttcctgcccgcaccaacacagaatttgtagag
gtcctgtctcgctcacacctcaaaatgagagtctgggagcgtggtgctggtgcgacgctt
gcttgtggaaccggtgcttgtgcagtagttgttgcagctgtcctcgagggtcgagctgaa
cggaaatgtgtagttgatttgcctggtggaccattggaaatcgaatggagggaggatgac
aatcatatttacatgactggtcctgcagaggctgtcttctatggatctgctgttcactag
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