Oryza glaberrima (African rice): 127757211
Help
Entry
127757211 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127757211
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127757211
Enzymes [BR:
ogl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
127757211
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127757211
Prokaryotic type
127757211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
127757211
NCBI-ProteinID:
XP_052138639
UniProt:
I1R4S9
LinkDB
All DBs
Position
12:4679912..4692043
Genome browser
AA seq
391 aa
AA seq
DB search
MSAATPDSAAAAKRPIDPSHADPSPAAKLQRSSPPDPSPPAEAQGDATDGGGEVAGVRSG
EMAGARNPQAQRYLVAVEYVGTRFSGSQQQLNQRTVVGVLEEAFHKFIGQPVSIFCSSRT
DTGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVKRAVNHFLQKNEGDIMVTDVRCVAP
DFHARYKALERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSF
RATGCQANSPMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVESSGKGSD
ASSTSEQSRFENGEEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVE
RILNLKAVTAAPPMAPACGLYLANVKYDLSV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccacccccgactccgccgccgccgccaagcgccccatcgacccctcccac
gccgacccgtcgccggcggcgaagctccagaggtcgtccccgccggatccctcgccgccg
gctgaggcgcagggcgacgccactgacggcggcggcgaagtggctggggtgagaagcggg
gagatggccggcgcgcggaaccctcaggcgcagcggtacctggtcgccgtggagtacgtc
ggcacccggttctccggctcccagcagcagctcaaccagcgcaccgtcgtcggcgtcctc
gaggaggcatttcacaaattcattggccagccagtctcaatcttctgttctagtcgaacg
gacacaggtgttcatgctttatcaaatgtttgtcatgttgacgtggagcggataagtaaa
agaaagcccggtgaagtgttgccacctcatgagcctggagttgtaaaacgtgcagtgaac
cattttctacagaagaatgaaggtgacataatggtgactgatgtccgttgtgttgcacca
gacttccatgctagatacaaagccctagagcgcacgtaccactatcgtttgctttctgga
tctgagccactatcagtttttgagaaaacctctgcttggcacatacccgaggatttaaat
gtacaggcaatgaagaaagcgtgcagcatacttgttgggcatcatgatttcagttcattt
cgagcaactggatgtcaggcaaactctcccatgagaactttggatgagcttagtgttaca
gaagtatttccttccatgttttttccttcaagcatggagcgatcagagatggagtcatta
gatgggcatcttgtttattcaagaacgtcagttgtggaatcttctggaaaaggatctgat
gcttctagtacaagtgagcaatcaagatttgagaatggagaagaatttggaaagaggcta
aggcatcgttgcttcgttgttactgcacgggcacgttcatttctttaccaccaggtaagg
ttaatggttggtcttctaaaatctgttggtactggagatctaacaactgaagatgttgag
agaattctgaatttaaaggcagtgactgcggcacctcctatggcacctgcttgtggtctc
taccttgccaatgtgaaatatgacctgagtgtttga
DBGET
integrated database retrieval system
