Oryza glaberrima (African rice): 127757411
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Entry
127757411 CDS
T08853
Name
(RefSeq) protein spotted leaf 11 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127757411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127757411
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127757411
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
U-box type E3
127757411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Neurochondrin
zf-C3HC4_4
HEAT_EZ
zf-Nse
Arm_2
zf-C3HC4
zf-C3HC4_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
127757411
NCBI-ProteinID:
XP_052138872
UniProt:
I1R7C5
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All DBs
Position
12:complement(21176541..21181707)
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AA seq
696 aa
AA seq
DB search
MAGDRAEEEEGEAPPPEARAAAAVERVAAAVEAVAAGAGAGAGAGEYRNAYRRQLLALSR
RIRLLGPFVEELRERRRGEGEGEEEERALAPLAAALEAALALLRLGREGSRISLVLERDS
VMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYNDLL
SVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQDPGEHIEKMSML
LKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTY
ERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEPPKRSTQPNKPT
PACSSSERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLL
SSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLS
VIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIM
GLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVML
HLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERMSRFLVQQQEEQESQ
SQASAQVPPQATPEQVPENDIPEQLDSPASQYPMVV
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaccgagcggaggaggaggagggggaggcgccgcctccggaggcgcgtgcc
gcggcggcggtggagagggtggcggcggcggtggaggccgtggcggcgggggcgggggcg
ggggcgggggcgggggagtaccggaacgcgtacaggcggcagctgctcgcgctgtcgcgg
cggattcggctgctggggcccttcgtggaggagctccgggagcggaggcggggggagggg
gagggggaggaggaggagcgggcgctggcgccgctcgccgccgcgctcgaggcggcgctc
gcgctgctccggctcggccgcgaggggagcaggatctccttggttcttgagagggacagc
gtaatgaaaaagtttcagggagtaattttgcagctggaacaagctctgtgcgacattccg
tacaatgaattggatatatcagatgaagttagagagcaggttgagttagtgcacgcacag
ctcaaaagagcaaaagaacggattgatatgcctgacgatgaattctacaatgatctacta
tctgtatatgacaagaactatgacccaagtgcagaactggctattcttggaagattgtca
gaaaagctacacttgatgacaatcaccgatctcacgcaagaatcactcgccttacatgag
atggtcgcatccggcggtggtcaggacccaggagaacacattgagaaaatgtcaatgcta
ctgaagaagattaaggattttgtgcaaacacagaaccctgacatggggcctcctatggct
tccagggtattggattcaaatggggattcaaggcctataaccattcctgacgagttccga
tgtccaatttctcttgagctgatgaaggatcctgttatagtgtctacagggcagacatat
gagcgggcatgcatcgagaaatggatagcatcaggccatcatacctgcccaaccacgcaa
cagaagatgtcaacctcagcattgacgccaaactatgtccttagaagtctcatttcccag
tggtgtgaaaccaatgggatggagccaccaaagcgctcaacccagcctaacaagcctacg
cctgcatgctcttcgagtgaacgtgctaacatcgatgctctgctatctaagttatgctct
ccagacactgaggagcagagatcagctgctgcagagcttcgcctccttgcaaagcggaat
gcaaacaaccggatttgcattgctgaggcaggtgccattcccttgctattgagtctgctg
tcctcatctgacctacggactcaagaacatgcagttactgcccttctgaacctctccata
catgaggacaataaggcaagcatcatatcatctggtgctgtcccaagcatagtccatgtt
ctgaagaatggcagcatggaggcacgggagaatgctgcggccacactttttagtctctca
gtgattgatgaatataaagtgacaattggagggatgggggctatccctgcacttgtagtg
ctgttaggcgagggtagccagcgggggaagaaggatgcagcagcagctctcttcaacttg
tgtatataccaagggaacaagggacgagcgatacgagctggccttgtgccactcatcatg
gggctggtgaccaaccccacaggagcgctcatggatgaggctatggcaatactctccata
ctatccagccaccctgagggcaaggcagcgattggggcggcagagcctgtccctgtgctt
gtggagatgatcggaagcggaaccccgagaaatcgagagaatgctgcggctgtcatgcta
catctgtgcagtggagagcaccatcttgtgcatttagctcgtgcgcaggagtgcgggatc
atggtcccgttgcgggagctggctttgaacggcaccgatagggggaagaggaaggctgtg
cagctgctcgagcggatgagcagattcctagtccagcaacaagaggaacaggagtcccag
tcgcaagcctccgcgcaggtccctcctcaggccacccctgagcaggtcccggaaaatgac
atccctgaacaattggacagcccagcgtctcaataccctatggttgtatga
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