Oryza glaberrima (African rice): 127757487
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Entry
127757487 CDS
T08853
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00061
Fatty acid biosynthesis
ogl00071
Fatty acid degradation
ogl01100
Metabolic pathways
ogl01212
Fatty acid metabolism
ogl04146
Peroxisome
Module
ogl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127757487
00071 Fatty acid degradation
127757487
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127757487
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ogl01004
]
127757487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127757487
Enzymes [BR:
ogl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127757487
Lipid biosynthesis proteins [BR:
ogl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127757487
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of breast milk
127757487
Exosomal proteins of breast cancer cells
127757487
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Motif
Other DBs
NCBI-GeneID:
127757487
NCBI-ProteinID:
XP_052138963
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All DBs
Position
12:complement(2207462..2215995)
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AA seq
709 aa
AA seq
DB search
MARQRQQQQREEERAPMGAAQRRLRAVSGHLQPPTESGGVDLAANPTAGEYAHVQGYSAV
LPEKLQTGKWNVYRSAKSPLKLINRFPDNPDIGTLHDNFVYAVETFRDCRYLGTRVCVDG
TVGDYKWMTYGEASTSRTAIGSGLIYHGIPEGARIGLYFINRPEWTIVDHACAAYSYVSV
PLYDTLGPDAVQFIVNHATVQAIFCVPQTLSTLLSFITQMPCVRLIVVIGGDNANMPSTP
TATGVEIITYSRLLSQGKMSSQSFRPPKPEDIATICYTSGTTGTPKGVVLSHGNLIANVA
GSSLVIKFYPSDVYISYLPLAHIYERVNQVSVVHYGVAIGFYQGDNLKLMDDLAALRPTV
FPSVPRLYNRIYAAITNAVKESGGLKERLFHAAYNAKRQAIINGRNPSPMWDRLVFNKIK
ARLGGRVRLMTSGASPLSADVMEFLRICFGGEVLEGYGMTETSCIISAMNIGDRLIGHVG
SPNPSCEIKLVDVPEMNYTSEDEPYPRGEICVRGPTIFCGYYKDEIQTREAVDEDGWLHT
GDIGLWMPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQSFIYGDSLNSSLV
AVVAVEPDVLKAWAASEGIQHEDLRQLCADPRARSAVLAEMVSIGKEAQLRGFEFAKAVT
LVAEPFTLENGLLTPTFKVKRPQAKAYFAKEIADMYAQLRQAEQIKPKL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcagcggcagcagcagcagcgggaggaggagagggccccaatgggcgcggcc
cagcggcggctgcgcgccgtctccggccacctccagccgccgacggagtccggcggcgtt
gacctcgccgccaaccccaccgccggcgagtacgcgcacgtgcagggctacagtgctgta
ctccctgagaagttgcaaactggaaagtggaatgtgtacagatccgcgaagtcacctctt
aagttaataaatagattccctgataacccagacattggaacgcttcatgataactttgtg
tatgcagttgaaacctttagggactgtagatacctgggcacaagagtctgtgttgatgga
acagttggggactacaaatggatgacatatggagaagctagtacaagccggactgcgata
ggttctggtcttatttaccatggaatacctgaaggtgcgcgcattggtttgtattttata
aacagacctgagtggaccatagttgatcatgcctgtgcggcatattcatatgtatccgtg
ccactttatgatactctaggtccagatgcagttcagttcattgttaaccatgcgacagta
caagctattttctgtgtgcctcaaacactaagcactctactaagctttataactcaaatg
ccgtgtgttcgtcttatagtggtaattggtggagacaatgcaaatatgccatctacccca
acagctactggagtggaaattataacttactccagactacttagccagggaaagatgagt
tctcaatcttttcgccctccaaaacctgaagatattgccactatttgttacactagtggc
actactggcacaccgaagggagttgttctttctcatgggaatttaattgcaaatgtagca
ggatcaagcctagtcattaagttttacccatctgatgtgtatatctcatatctaccttta
gctcacatctatgagagagttaaccaggtttcagtggttcactatggtgttgccattggt
ttctaccaaggggataatttgaagctgatggatgatctggctgcattgagaccaacagta
tttcctagtgtgcctcggctatataatagaatttatgctgcaattacaaatgctgtcaag
gagtctggagggttgaaagaaagattgtttcatgctgcatacaatgctaagaggcaagcg
attattaatgggagaaatccgtccccaatgtgggacaggttggtatttaacaaaataaaa
gctaggcttggtggacgtgtgaggcttatgacttcaggcgcttctccattgtcagctgat
gtaatggaattcctaagaatatgttttggtggtgaagtactcgaaggatatggaatgaca
gagacatcatgtatcatctctgcaatgaatattggtgataggttaattggtcatgtcgga
tctccaaatccatcttgtgagattaaactagtggatgtcccagaaatgaattacacctct
gaggatgaaccatatcctcgtggagaaatctgtgttaggggacctacgatattctgtggt
tactataaagacgaaatccaaactagagaggccgttgacgaggatggttggttacacact
ggagacataggtttgtggatgcctggagggcgtctaaaaattatagataggaaaaagaac
attttcaagttagctcaaggagaatacatagctcccgagaagattgagaatgtctatgct
aagtgcaagtttattgcgcagtcctttatatatggtgatagtttaaactcttctttggtt
gccgtagtagcagttgaaccagatgtgttgaaggcttgggctgcatctgagggaatccag
cacgaggatttaagacagctttgtgctgatccgagagcaagatctgctgtcctggctgag
atggtctctattggaaaggaagcacagctaagaggttttgaatttgccaaagctgttacc
cttgttgctgaacctttcacattagaaaatggtctcctcaccccaactttcaaggtcaaa
agaccgcaagctaaggcatactttgcaaaagaaatcgcagatatgtatgcacaactgcgc
caagcagaacaaataaaacctaagctgtaa
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