Oryza glaberrima (African rice): 127757539
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Entry
127757539 CDS
T08853
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127757539
Spliceosome [BR:
ogl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127757539
Other components
Complex C specific factors
127757539
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
127757539
NCBI-ProteinID:
XP_052139032
UniProt:
I1R7V7
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Position
12:complement(23585994..23589530)
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AA seq
842 aa
AA seq
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MEEDAEGMDRFDMEGDFEGGRFGRDGEFYYERRRERAPQTRDDALYGVFAEGDSDYDSDD
GRRRSRRKRRRDEAEPDLSRPVHFQSAGKFMPSKEPEPEPEERPGLGAAPASASASAAGA
DDAVEEEDLDLPTAFGQRIAEGARARREERARERETAARRRQASGVAAGKPAPALGSLGS
NTKVAKMMAMMGYKDGMGLGKNEQGIVAPVETTLRPKNAGLGSVEGFKEPKPFFTKENLP
PPPPPAPAKKEQQRWSKKAGAKKGPVLTKNELLAMRSEQEQDEQPTVVQKVIDMRGPQAR
VLTDLKGLNVEQEMEANDLPMPELQYNVRLLVDEAKADIVRLDGQLQREQEKVASLVREK
EKVAKQEALQKCQLQVMEKIAGVLEQVRVDDTAGVLSLEGLLKTFQELKACYVEEFKMCS
VAWIACRFAHPLLIRVFQGWQPLQNPLFGLEIMSSWKDLLQGDQAYDFSGDVESMAPYAQ
LVSEVILPAVRISGTNSWEARDPEPMLRFLESWERLLPPIVLQSILEHVIMPKLSAAVDS
WDPRREKVPIHVWVHPWLPMLGQRIDTLCHSIRYKLSSVLHVWQAHDASAYAVLSPWKDV
FDAASWEDLIVRYIVPKLKMALQEFQINPANQKLDQFNWVMIWASAIPVHHMVHMLEVDF
FSKWQQVLYHWLCSPNPDFNEIMNWYKGWKGLFPPELLANERIRMLLTAGLDMMNRAAEG
LEVVQPGARENVGYLRATEKRQFDAAQQASQYTTHHAVPGAAMAALSFKESIQAYAMDQG
LLFMPRVGKFYNGMPVYEFGTVSICIDSVKRLLYAQLQEGIERWSAVSLTQLIEMNRKAR
QR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgcggaggggatggaccggttcgacatggaaggcgacttcgagggcggc
cggttcggcagggacggcgagttctactacgagcgccgccgcgagcgcgcgccgcagacg
cgcgacgacgcgctctacggcgtcttcgccgaaggcgactccgactacgactccgacgac
ggccgccgccgcagccgccgcaagcgccgcagggacgaggccgagcccgacctctcccgc
cccgtccacttccagtccgccggcaagttcatgcccagcaaggagcccgagcccgagccc
gaggagaggcccggccttggcgccgcccccgcctccgcctccgcctccgcggcgggtgcg
gatgatgcggtggaggaggaggatctcgacctgcccacggcgttcgggcagcggatcgcg
gagggcgcgagggcgaggcgggaggagagggcgcgggagcgggagacggccgcgcggcgc
aggcaggcgtcgggggtggccgccgggaagccggcgccggctctggggagcctggggtcc
aacacgaaggtggccaagatgatggccatgatggggtacaaggatgggatggggctcggc
aagaacgagcaaggtatagtcgcgccggtggagaccactctgcgccccaagaacgccggt
ctcggaagcgtcgaggggttcaaggagcccaagcccttctttaccaaggagaatttgccg
cctccgcctccgccggcgcccgccaagaaggagcagcagaggtggtcgaagaaggccggt
gcgaagaaaggccccgtgctgacgaagaatgagttgcttgcgatgcgcagcgagcaggag
caggatgagcagcctacggttgtccagaaggtgatcgacatgcgagggcctcaggcacgc
gtgctaacggacttgaaggggctcaacgtggagcaggagatggaggcgaacgatctgccg
atgccagagttgcaatacaatgtgaggctgcttgtcgatgaggccaaggctgatattgtg
aggctggatgggcagctgcaacgggagcaggagaaggtggcaagcttggtgcgggagaag
gagaaagtggcaaaacaggaggctttgcagaaatgccaactacaagttatggagaagata
gcaggagtgctggagcaggtccgagtggatgatactgcaggtgttctctctctggaaggg
ttgcttaagacctttcaggaattgaaggcatgctatgtggaggagttcaagatgtgtagt
gttgcatggattgcctgccggtttgctcatccgctactaatccgagtcttccaggggtgg
caaccactgcaaaatccattgtttggcttggagatcatgtcatcatggaaagatttgctg
cagggggatcaagcatatgacttctcaggtgatgttgaatcgatggctccatatgcacaa
ttggttagcgaggtcatcctacccgctgtgaggatatcaggaaccaattcatgggaggct
agggatccagaaccaatgcttcggtttcttgaatcatgggaacggttgctgccccctatc
gtgctccagtcaatattggagcatgtcataatgccaaagctttcggctgcagtagattct
tgggacccacgcagggagaaggtaccaatccatgtatgggtgcatccatggttgccaatg
ctaggacagaggatagataccttgtgccattctattcgatacaaactgagtagtgttctc
catgtttggcaagctcacgatgcatcagcctatgctgtgttgtctccatggaaggatgta
tttgatgccgcaagctgggaagacttgattgtgcgttatatcgtaccaaaattgaaaatg
gcactgcaagagtttcagatcaaccctgcaaaccagaaactcgatcagttcaactgggta
atgatttgggcttctgcaatcccagtacaccatatggtccatatgttggaagtagatttc
ttcagcaagtggcagcaggtcctctaccattggctgtgttcaccaaatcctgatttcaat
gaaatcatgaactggtacaagggctggaagggccttttcccaccagaattgcttgccaat
gagcgcatacggatgcttttaacagctggccttgacatgatgaaccgagctgctgaaggc
cttgaggtggtgcaacctggcgccagggaaaacgtgggctacttgagagcaacagagaag
aggcaatttgatgcagcacagcaagcatcacaatacacgactcaccatgcggtgccagga
gcagccatggcggctttgagctttaaggagtctatccaggcatatgcaatggaccaaggc
ttattgtttatgcccagagttggtaaattctacaacggtatgccagtgtatgagtttggc
accgtgagtatttgcattgactctgtgaagcgcctactctatgcacaacttcaagaagga
attgagagatggagtgctgtctctcttacacaattgatagaaatgaaccggaaggcgagg
caacgctaa
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