Oryza glaberrima (African rice): 127757787
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Entry
127757787 CDS
T08853
Name
(RefSeq) anaphase-promoting complex subunit 5 isoform X1
KO
K03352
anaphase-promoting complex subunit 5
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127757787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127757787
03036 Chromosome and associated proteins [BR:
ogl03036
]
127757787
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
127757787
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
127757787
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC5
TPR_1
TPR_8
Apc5_N
TPR_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
127757787
NCBI-ProteinID:
XP_052139322
UniProt:
I1R821
LinkDB
All DBs
Position
12:24290133..24298638
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AA seq
916 aa
AA seq
DB search
MNVFAGVGGGAAGKEAGTVGGGALLELTPHKLALCHLVQVFAPPPQAGVSAPALPFPFES
VAHHNRLGLFLFALTRSCEDFREPPLEELLRQLKAVDALVNGWLCEQLTSTLSALTSPDD
LFNFFDKLRGVLSAPEGANVEDEFLDPNSQLGVFLRCCILSFNTMTFEGVCHLLANLVEY
CNSADTSYDLAEDEDFNSEMEMSNFMDTNMHVRDGVFDKYNQGYAPRSHMVDSSSSLVHA
PASLHDFEEANMFKADDNLGPTCLRSRWQLEAYLNQQADILEKDPSSVPLNSFNATMSQL
QKLAPELHRVQFLQYLNALTHDDYVAALDNLHRYFDYSAGMQGLFSRTASPFQDIIVGKY
ESALLCLGNLHCYFGHPKKALEAFTEAVRVSQMNNDDSCLAYILGAISNLLSKIGMSSTV
GTIGSPYSLGNNIGLGTPLSIQQQLLVLLKRSLKRADTLKLTSLLSFDHLSLAKFVLKHV
QRPLVSFGPNASTKLRTCPADVCKNLRLSSRVLTDFGTDGLSASNDNGSFSTSWLRNLSA
ASNSWCSSSKKSGKLLTNDFDNFHFHAQPSPIPASVLQLAGSAYLLRATAWEHYGSAPMV
RMNSLVYATCFADAASSSELSLAYVKLIQHLATFKGYSAAFSALKLAEEKFPLSANSHIQ
LLKMQLLHERALHRGHLKVAQQICDEFAVLSSSVSGVDIELKTEARLRHARTLLAAKQFS
QAANVANSLFSTCYKYNMQVENASVLLLLAEIQKNSDNAVLGLPYALASQSFCKSFNLDL
LEASATLTLTELWLALGSTHAKRALSLVCQSLPMILGHGGLELRARAHIVLAKCYLSDPK
FSVSEDPSAVLDPLNQAAEDLEVLEYHEMAAEAYYLKAMVYNNLGKLDEREEAAASFKEH
TLALENPYNEEDSLAC
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgttcgcgggggtgggcgggggcgcggcggggaaggaggcggggacggtgggc
ggcggggcgctgctggagctgacgccgcacaagctggcgctgtgccacctcgtgcaggtg
ttcgcgccgccgccgcaggccggggtctcggcccccgcgctgcccttccccttcgagtcc
gtcgcccaccacaaccgcctcggcctcttcctcttcgccctcacccgctcgtgcgaggat
tttcgggaacctccactggaagagcttctaaggcagctgaaggcagttgatgctttggtt
aatggctggctctgtgagcagcttacaagtaccctttcagcgcttacttcaccggatgat
ctgttcaacttctttgataagctacgaggcgttctgtctgcgccagaaggtgcaaatgtg
gaagacgaatttctggatccaaatagtcagcttggagtttttcttcgttgctgtatactt
tccttcaatacaatgacctttgagggtgtctgccatcttttggcaaatcttgtggagtat
tgtaactccgctgacacctcatacgatttggcagaagatgaggacttcaacagtgaaatg
gaaatgagcaacttcatggatacaaatatgcatgttagagatggtgtatttgacaaatac
aatcaaggttatgcccctaggagccatatggtagacagctcgtcatctctagtacatgct
ccagcctcactccatgattttgaggaagctaatatgttcaaggcagatgataacctgggt
ccaacttgtctgaggtcaagatggcaattagaggcatatcttaaccaacaagctgatatt
cttgagaaggatcctagttcggtgcctttgaattcatttaatgctactatgagtcaactt
cagaaattagctccagagctccatcgtgtccaatttttgcagtatttgaatgctcttacc
catgatgactacgttgctgcattagataatcttcaccgctattttgattacagtgcaggg
atgcaaggacttttcagtcgtaccgcgtctccattccaagatattatagttgggaagtat
gagagtgctttgctctgcttaggtaacttgcactgttattttggacatccgaagaaagcc
ttagaggcattcacagaagcagtgcgtgtttcccaaatgaacaatgatgattcatgcctg
gcctatatattaggagctatttccaatctgttatcaaagataggcatgtcaagcacagtt
ggaacaattggttctccttattcacttggaaataacatcggattaggcacaccgctgtcc
attcagcaacagctgcttgttcttttaaagagatcacttaagcgagctgataccttgaaa
cttacaagcttgctgtcctttgatcacctttctcttgcaaaatttgttctgaagcatgtc
caaaggcctctggtgtcctttggccctaatgcttccacaaagcttagaacatgtcctgca
gatgtctgcaagaatttgagattaagttcacgtgtgttgactgactttggcacagatggc
ttatcagcatcaaatgataatggtagttttagtacttcatggcttaggaatctgtctgct
gcttctaattcttggtgtagcagctcgaaaaaatctggaaaactacttacgaatgacttc
gacaatttccattttcatgcacaaccaagtcctatacctgcatcagtattgcaattagct
ggctcagcttatttgctgagggccactgcttgggaacactacgggagtgctccgatggtt
cgaatgaattcgttggtctatgcaacctgctttgctgatgctgcaagttcatcagagctg
tcgctagcatatgtcaagctaattcagcatttagcaactttcaaagggtattcagcggca
ttctctgctctcaagcttgctgaagagaagttcccgttgtcagcaaattcacatatccag
cttcttaaaatgcaattattgcacgagcgtgctctgcatcgaggacacctgaaagttgcg
caacagatctgtgatgagtttgctgtgttgtcatcttctgttagtggagtcgacattgag
ctgaagacagaagctaggttacggcatgctcgcacgcttcttgccgcaaaacaatttagt
caggcagcaaatgtggcaaattctcttttctctacttgctacaagtacaacatgcaggtg
gagaatgcaagtgttcttttattacttgcagagatacagaaaaattctgacaatgcagtc
cttgggcttccttacgcattagctagtcaatcattctgcaaatcatttaacttagatctg
cttgaagcctcggctacactaactcttactgaattatggctggctcttggatcaacccat
gcaaagagggccttgagtcttgtttgccaaagccttccaatgatccttggtcatggtgga
cttgagctgcgcgctcgagctcacatagttcttgcaaaatgctatctgtccgatccaaaa
ttctcagtttccgaagacccttctgctgttctagatcctctgaaccaagctgcggaagat
ctggaggttttggagtaccacgaaatggcggcagaagcatactacctaaaggcaatggtc
tacaacaatctaggaaaactggatgagagggaggaagctgcagcttctttcaaggagcac
acactcgcccttgaaaacccatataacgaagaggattcacttgcttgctga
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