Oryza glaberrima (African rice): 127757946
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Entry
127757946 CDS
T08853
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00061
Fatty acid biosynthesis
ogl00071
Fatty acid degradation
ogl01100
Metabolic pathways
ogl01212
Fatty acid metabolism
ogl04146
Peroxisome
Module
ogl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127757946
00071 Fatty acid degradation
127757946
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127757946
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ogl01004
]
127757946
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127757946
Enzymes [BR:
ogl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127757946
Lipid biosynthesis proteins [BR:
ogl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127757946
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of breast milk
127757946
Exosomal proteins of breast cancer cells
127757946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127757946
NCBI-ProteinID:
XP_052139498
UniProt:
I1R4D8
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Position
12:3498398..3503721
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AA seq
698 aa
AA seq
DB search
MNPYFVGLLVPIAVSLLLRKRRMVGKMRALPVDVGGEPGYAIRNYRFKQPVETHWEGVTT
LAELFEQSCKDYVNMPLLGTRKLISREQESSLDGRSFEKLHLGEYDWKCYAEVFKSVCNF
ASGLIRLGHQKTERVAIFAETRAEWQIALQACFRQNITVVTIYASLGEEALCHSLNETEV
TTVVCGQKELKKMIDISGQLDTVKRVIYINEEGISAEVSLAQKSTSWIIEPFEDVGRLGD
TAPVDANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPEIGKKDVYLAY
LPLAHILELAAEALIAAVGASIGYGSPLTLTDTSNKIKKGTLGDASALKPTLMTAVPAIL
DRVRDGVRKKVDTKGGVAKQLFDVAYNRRLAAVNGSWLGAWGLEKLLWDMLVFKKVRAVL
GGKIRFVLSGGAPLSGDTQRFINICLGVPIGQGYGLTETCAGGTFSEYDDPSVGRVGAPL
PCSYIKLIDWSEGGYLTSDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDEKGMRWFY
SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVENIMIHADPFHSYC
VALVVAAHNELENWASQQGVTYTDFVDLCQKPEAVKEVLGSLSKAAKQARLEKFEIPAKI
KLISEPWTPESGLVTAALKLKREVLRKTYEDDLAKLYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttattttgttggtcttctcgtcccaattgcggtatctcttctcctacggaag
aggagaatggttgggaagatgagggcactgccagttgatgtgggtggagagcccgggtat
gcaatccgcaactatcgattcaagcaaccggttgaaactcactgggaaggtgtcaccacg
ctcgccgagctgtttgagcagtcctgcaaggattatgtcaacatgccgctcctcggcacc
aggaagctcatctccagggaacaggaatcatcacttgatgggaggtcctttgagaagctt
catcttggagagtatgactggaagtgctacgctgaggtattcaagagtgtttgcaacttc
gcatctggactaattcggctaggccatcagaagactgagcgtgttgctattttcgccgag
acgcgggctgagtggcaaattgctctgcaggcatgcttcaggcaaaatattacagttgtc
acaatctacgcctccttgggagaggaagcactgtgccactcactaaatgagacagaggtt
actactgttgtatgtggtcagaaagaactgaaaaaaatgattgatataagtgggcagctt
gacacagtaaagcgagttatctatatcaatgaggaaggaatctcagctgaagtttcttta
gctcaaaaaagcactagctggataattgagccgtttgaggatgtaggtagattgggagat
acagcacctgttgatgcaaacatgcctctcccatctgacgtagcagtgataatgtataca
agcggtagcaccggattgcctaagggagtaatgatgacccatcggaacgtcctggctaca
ctttcagcagttatgaccattgtgcctgaaattggtaaaaaggatgtatacctggcctac
ctgccacttgcacacattcttgagttggcagctgaggcactcatagctgctgttggggct
tccataggatatggatcacccttgaccctgactgatacatcaaacaaaataaaaaaggga
acactgggtgatgcttctgcactcaagccaacactgatgaccgctgtacctgctatactt
gatcgtgttcgtgatggtgtgagaaagaaggtggatacaaagggtggtgtagcaaagcag
ttatttgatgttgcctataatcgtcgacttgccgcagtcaatggaagttggctgggtgca
tggggattagagaaactcttgtgggatatgcttgtcttcaaaaaggtgcgagcagttttg
ggaggaaaaattcgctttgtactttcaggtggagcacctctatcaggagatacccagaga
tttatcaatatatgccttggggttccaatagggcaagggtatggtcttactgagacatgt
gctggaggaacattttctgagtatgatgacccatctgttggtcgcgttggtgctccacta
ccttgttcgtacattaagctgattgactggtcagaaggtggatacttaacaagtgactcc
ccaatgcctcgaggagagattgtcattggtggtcccaatgtaactaaaggctatttcaag
aatgaagctaagacaaatgaagtctataaggatgacgaaaaaggtatgcgatggttctat
tctggtgacatcgggcgcttccacccagatggctgccttgaaatcattgaccgtaaaaag
gatattgtgaagcttcaacatggtgaatatgtgtctctcgggaaggtggaggctgctctg
attgtgagcccatatgtggagaacatcatgatccatgctgatcctttccacagttactgt
gttgcacttgtggtagctgcacacaatgagctggaaaactgggcttcgcagcagggagtt
acatacaccgatttcgtagatttgtgccagaagccagaggctgttaaagaagtgcttgga
tctctatcaaaggctgcgaagcaagcgcgactggagaagtttgagatcccggccaagatc
aagctgatatctgagccatggaccccggagtctggccttgtcactgctgccctcaagctc
aagagggaagtgctcaggaagacatatgaggatgatcttgctaaactatacgcctga
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