Oryza glaberrima (African rice): 127757967
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Entry
127757967 CDS
T08853
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00040
Pentose and glucuronate interconversions
ogl01100
Metabolic pathways
Module
ogl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127757967
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
127757967
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
127757967
NCBI-ProteinID:
XP_052139523
UniProt:
I1NNL7
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Position
1:complement(17041560..17043290)
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AA seq
407 aa
AA seq
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MAVTMDNAIRFMFILSVVYGAAYAKKSEAKVASAPSLVAAANTVFDITELGAVADGKTDS
TKAVQDAWDAACGLAGSQKVVIPKGEFMTGSLNFSGPCKGYVTVQIDGTMFGSNDIPKYN
KGNWIEILHIDNVLVNGSGTLDGQGAAVWKDECKILPNTLVLDYVKNGTVSGLKLVNAKF
FHINVYMSKGVTIKNVTITAVANSPNTDGVHIGDSSEISVSDLTIATGDDCISVGPGSSW
ISIQGITCGPGQGISVGCLGRFKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITVS
RLTFENIQMDGVANPVIVDQKYCPEKDCPEKKGSKTVTIKNVTFRNITGTSNTPEAVSLL
CSDQLPCSGMELLDVNLKYNGKDNKTMAVCTNAKGISKGSLQALDCL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgacgatggacaacgccatcaggttcatgttcatccttagcgtcgtctacggc
gccgcctatgccaaaaagtctgaggccaaggtcgctagtgctcctagcctagtggctgcg
gccaacacagtcttcgacatcaccgagctcggcgccgtcgctgacggcaagacagatagc
accaaggcggtccaggatgcgtgggacgcggcgtgcgggttggctgggtcacagaaggtg
gtgatccccaagggagaattcatgaccgggtccctcaacttcagcgggccgtgcaagggc
tacgtcaccgtccagatcgatggcaccatgtttggctccaatgacatccccaagtacaac
aagggcaactggatcgagatcctccacatcgacaacgtcctcgtcaacggctccggcacc
ctcgacggccagggcgccgccgtctggaaagacgaatgcaagatcttgcccaacacgttg
gtgctggactacgtgaagaatgggaccgtgtcggggctcaagctggtgaacgccaagttc
ttccacatcaacgtgtacatgtccaagggtgtgacgatcaagaacgtgaccatcaccgcg
gtggcgaacagcccgaacacggacggtgtccacatcggcgactcgtcggagatcagcgtg
tcggacttgaccatcgcgacgggggacgactgcatctccgtggggccggggagctcgtgg
atcagcatccaggggatcacctgcgggcccgggcaggggatcagcgtggggtgcctgggc
aggttcaaggacgagaaggacgtgacggacgtgacggtccgcgactgcgtgctccgcaac
acctccaacggcgtccggatcaagtcgtacgaggacgtgctgtccccgatcacggtgtcc
aggctgacgttcgagaacattcagatggacggggtggccaacccggtgatcgtggaccag
aagtactgccccgagaaggactgccccgagaagaaggggagcaagacggtgaccatcaag
aacgtgacgttccgcaacatcaccggcacctccaacacgccggaggccgtcagcctgctc
tgctccgaccagctgccctgcagcggcatggagctgctcgacgtcaacctgaagtacaac
ggcaaggacaacaagaccatggccgtctgcaccaacgccaagggcatctccaagggctcg
ctccaggccctcgattgcctctga
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