Oryza glaberrima (African rice): 127758097
Help
Entry
127758097 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127758097
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127758097
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127758097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
POL2_thumb
ALIX_LYPXL_bnd
CREPT
CSN7a_helixI
Motif
Other DBs
NCBI-GeneID:
127758097
NCBI-ProteinID:
XP_052139687
UniProt:
I1R3P6
LinkDB
All DBs
Position
12:complement(1348638..1356868)
Genome browser
AA seq
586 aa
AA seq
DB search
MADTKAEAKAETIGGGGGGGSGSFSEQAFVEKLNKLNNTATRIQTLSNWCIFHRKRARKV
VDTWEKQYNSANKDKKVSFLYLSNDILQNSKRKGGEFVNEFWRVLPGLLKDFYVNGGEDG
KKVVGRLIDIWDERKVFGTRIESLKDDILGGSTHTMGNNVNSSNPSSNPSSVSKAARKDS
GTVTRKLTVGGMPEKILTAYQSVLDQHFDEDTALNKCNNAVSVLDRMDKDVDDACTQGIQ
QGSSLISDLQGQETVLKQCIEQLESVNMARITLINKLREALGEQEAKSELLRNQLHVARA
KAEHAMQLKQRLGSALNNGAGSSSSPLMVTLPPGQTAAMMQNSAAMPIFPQFQPLHPATS
LPATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSGDLSAGPP
GFESNKKPRLDNPIHASDMSAPPFFGQLPQVQPQIGATAALGGTQPPTQANQAAGSFPPP
PPPLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPPPLPNIMSAGFPRLSAPPPLPLPTQSQ
NQSQPQQQQSPQAPQQSPTSTGFFQPPGAGFFPPVQVQQSPSAQRQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaaggcggaggcaaaggcggaaactatcggcggcggcggcggcggcggc
tctggctcgttcagcgagcaggcgtttgttgagaagcttaacaagctcaacaacacggcg
actaggatccagacactttcaaattggtgcatttttcaccgaaagagagccagaaaggtt
gttgatacatgggagaagcagtataacagtgcaaataaggataagaaagtatcattcctg
tacctgtcaaatgatatcctgcaaaatagtaaacgcaagggaggggagtttgtgaatgaa
ttttggagggttcttcctggattattgaaagacttttatgtcaatgggggagaagatgga
aagaaagtagttggaagattaatagatatttgggatgagcggaaggtctttggaacccgt
attgaaagtctgaaagatgacattcttggtggtagcactcatacaatgggtaacaatgtc
aatagctcaaatccaagctctaacccctcttcagtttccaaagctgcacggaaagattct
ggtacagtaacaagaaaacttactgttggcgggatgccagaaaagattctaacagcatat
cagtcagtgcttgatcaacattttgatgaagacacagctttaaacaaatgcaataatgct
gttagtgttttggataggatggataaagatgtagatgatgcttgtactcaaggtattcag
caaggatcatcgttgatttctgaccttcaagggcaggaaacagtccttaagcagtgcatt
gagcaacttgaaagtgtcaacatggctagaataaccctaatcaataaactaagagaagcc
ctcggcgaacaggaagcaaagtcagagcttcttcgcaatcagttgcatgtggctcgagca
aaggctgaacatgccatgcaactaaaacaacgacttggtagtgccttgaacaatggtgca
ggatctagttctagtccactgatggttacacttccaccaggacaaacagctgccatgatg
cagaattcagcagcaatgccgatatttccccagtttcaaccactgcatccagcaacctca
cttcctgccacatccagtgctgttggtgatgagcccaaaaaaactgcagcagctatggca
gataagcttgcatctttgtcagctcctgagaaggtgctctcctccattttctcttccctt
gctgctgaacaagcaaggaatagtggttcgacttctggagatctttctgcaggacctcca
ggctttgagagcaataagaagcctaggcttgacaaccccattcatgctagtgacatgagt
gctcccccattctttgggcaactgccgcaggtgcaaccacagattggagcaacagctgct
cttggaggcacacagccaccaacacaagcaaaccaagcagctggttcatttccaccacct
ccacctccattaccacttatgccacaatttgttcaaaatactggaggaatgtttggaatg
ggaccttttgggatggtgagtggctctgcgccacctccacccccattgcccaacattatg
tcagcaggttttccaagactaagtgcgcctccacctctgcctctgcctacacaatctcag
aaccagagccagccccagcagcagcagtctccacaggcaccacagcaatcgccgacctcg
actggattttttcaaccaccaggtgctgggttcttcccaccagtgcaggttcagcaatct
ccatctgcccaacggcaatga
DBGET
integrated database retrieval system
